RCSB PDB: Search

7RZD	Download File View File

CRYSTAL STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PEPTIDE

Patskovsky, Y., Patskovska, L., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) MLL cleavage product N320 peptide (protein)
Unique Ligands	CL, GOL, NA

Explore in 3D

7RZJ	Download File View File

CRYSTAL STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PHOSPHOPEPTIDE

Patskovsky, Y., Patskovska, L., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) MLL cleavage product N320 phosphopeptide (protein)
Unique branched monosaccharides	FRU, GLC

Explore in 3D

7S79	Download File View File

STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH SYNTHETIC PHOSPHONO-MLL PEPTIDE ANALOG

Patskovska, L., Patskovsky, Y., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) MLL cleavage product N320 (protein)
Unique Ligands	GOL, NA

Explore in 3D

7S7D	Download File View File

STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH SYNTHETIC SULFO-MLL PEPTIDE ANALOG

Patskovska, L., Patskovsky, Y., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) MLL cleavage product N320 (protein)
Unique Ligands	GOL

Explore in 3D

7S7E	Download File View File

STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH DOT1L(998-1006) PEPTIDE

Patskovska, L., Patskovsky, Y., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) Histone-lysine N-methyltransferase, H3 lysine-79 specific (protein)
Unique Ligands	NA
Unique branched monosaccharides	FRU, GLC

Explore in 3D

7S7F	Download File View File

STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH DOT1L(998-1006) PHOSPHOPEPTIDE

Patskovska, L., Patskovsky, Y., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) Histone-lysine N-methyltransferase, H3 lysine-79 specific (protein)
Unique branched monosaccharides	FRU, GLC

Explore in 3D

7S8A	Download File View File

STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PHOSPHOPEPTIDE, CUBIC CRYSTAL FORM

Patskovska, L., Patskovsky, Y., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) MLL cleavage product N320 phosphopeptide (protein)
Unique Ligands	12P, 1PE, ACT, PE8, PEG, PG4, PGE

Explore in 3D

7S8E	Download File View File

STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PHOSPHOPEPTIDE AND BOUND GLYCEROL

Patskovsky, Y., Nyovanie, S., Patskovska, L., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) MLL cleavage product N320 phosphopeptide (protein)
Unique Ligands	GOL

Explore in 3D

7S8F	Download File View File

STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PEPTIDE AND BOUND GLYCEROL

Patskovsky, Y., Nyovanie, S., Patskovska, L., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-7 alpha chain (protein) MLL cleavage product N320 peptide (protein)
Unique Ligands	GOL

Explore in 3D

7S8I	Download File View File

PHOSPHOPEPTIDE-SPECIFIC LC13 TCR, MONOCLINIC CRYSTAL FORM

Patskovsky, Y., Nyovanie, S., Patskovska, L., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Homo sapiens
Macromolecule	TRAV27_LC13 TCR ALPHA CHAIN (protein) TRBV27_LC13 TCR BETA CHAIN (protein)
Unique Ligands	CL

Explore in 3D

7S8J	Download File View File

PHOSPHOPEPTIDE-SPECIFIC LC13 TCR, ORTHORHOMBIC CRYSTAL FORM

Patskovska, L., Patskovsky, Y., Nyovanie, S., Natarajan, A., Joshi, B., Morin, B., Brittsan, C., Huber, O., Gordon, S., Michelet, X., Schmitzberger, F., Stein, R., Findeis, M., Hurwitz, A., Van Dijk, M., Buell, J., Underwood, D., Krogsgaard, M.

(2023) Nat Commun 14: 3763-3763

Released	2022-11-02
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Homo sapiens
Macromolecule	TRAV27_LC13 TCR ALPHA CHAIN (protein) TRBV27_LC13 TCR BETA CHAIN (protein)
Unique Ligands	CL

Explore in 3D

8F11	Download File View File

T4 lysozyme with a 2,6-diazaadamantane nitroxide (DZD) spin label

Wilson, M.A., Madzelan, P., Rajca, A., Stein, R., Yang, Z.

(2023) J Am Chem Soc 145: 25726-25736

Released	2023-02-15
Method	X-RAY DIFFRACTION 1.12 Å
Organisms	Escherichia phage T4
Macromolecule	Endolysin (protein)
Unique Ligands	BME, CL, K, X8R

Explore in 3D

8VOW	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgATP and Vi

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.44 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	ADP, ATP, MG, VO4

Explore in 3D

8VOX	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgADP

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.07 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	ADP, MG

Explore in 3D

8VOZ	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgADP and substrate

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.03 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	A1ACX, ADP, MG, POV

Explore in 3D

8VP1	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with ATP

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.48 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	ATP

Explore in 3D

8VP3	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with MgADP and Substrate

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 2.96 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein) Bacteriocin-type signal sequence-containing protein (protein)
Unique Ligands	A1ACX, ADP, MG, POV

Explore in 3D

8VP5	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with ADP and Substrate

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.18 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein) Bacteriocin-type signal sequence-containing protein (protein)
Unique Ligands	A1ACX, ADP, POV

Explore in 3D

8VP6	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with Mg_class_2

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 2.97 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)

Explore in 3D

8VP8	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with ATP and Substrate

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.37 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	ATP

Explore in 3D

8VP9	Download File View File

Cryo-EM structure of the cysteine-free ABC transporter PCAT1 bound with ADP and Substrate

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.18 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein) Bacteriocin-type signal sequence-containing protein (protein)
Unique Ligands	A1ACX, ADP

Explore in 3D

8VPA	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with ADP

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.11 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	ADP

Explore in 3D

8VPB	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with MgADP_Class_2

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.23 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	ADP, MG

Explore in 3D

9AZL	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with MgADP class1

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 2.99 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)
Unique Ligands	ADP, MG, POV

Explore in 3D

9BAA	Download File View File

Cryo-EM structure of the ABC transporter PCAT1 bound with Mg_class_1

Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.

(2024) Nat Commun 15: 9055-9055

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.39 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	ABC-type bacteriocin transporter (protein)

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type