RCSB PDB: Search

6LZQ	Download File View File

Chitin-specific solute binding protein from Vibrio harveyi in complex with chitotriose.

Kitaoku, Y., Ubonbal, P., Tran, L.T., Robinson, R.C., Suginta, W.

(2021) J Biol Chem 297: 101071-101071

Released	2021-02-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Vibrio harveyi 1DA3
Macromolecule	Peptide ABC transporter, periplasmic peptide-binding protein (protein)
Unique Ligands	CA, CL, EDO, MG
Unique branched monosaccharides	NAG, NDG

6LZT	Download File View File

N409A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose

Kitaoku, Y., Ubonbal, P., Tran, L.T., Robinson, R.C., Suginta, W.

(2021) J Biol Chem 297: 101071-101071

Released	2021-02-24
Method	X-RAY DIFFRACTION 1.853 Å
Organisms	Vibrio harveyi 1DA3
Macromolecule	Peptide ABC transporter, periplasmic peptide-binding protein (protein)
Unique Ligands	CA, MG
Unique branched monosaccharides	NAG

6LZU	Download File View File

F411A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.

Kitaoku, Y., Ubonbal, P., Tran, L.T., Robinson, R.C., Suginta, W.

(2021) J Biol Chem 297: 101071-101071

Released	2021-02-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Vibrio harveyi 1DA3
Macromolecule	Peptide ABC transporter, periplasmic peptide-binding protein (protein)
Unique Ligands	CA, CL, EDO, MG
Unique branched monosaccharides	NAG

6LZV	Download File View File

F437A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.

Kitaoku, Y., Ubonbal, P., Tran, L.T., Robinson, R.C., Suginta, W.

(2021) J Biol Chem 297: 101071-101071

Released	2021-02-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Vibrio harveyi 1DA3
Macromolecule	Peptide ABC transporter, periplasmic peptide-binding protein (protein)
Unique Ligands	CA, CL, EDO
Unique branched monosaccharides	NAG

6LZW	Download File View File

W513A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.

Kitaoku, Y., Ubonbal, P., Tran, L.T., Robinson, R.C., Suginta, W.

(2021) J Biol Chem 297: 101071-101071

Released	2021-02-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Vibrio harveyi 1DA3
Macromolecule	Peptide ABC transporter, periplasmic peptide-binding protein (protein)
Unique Ligands	CA, CL, EDO, MG
Unique branched monosaccharides	NAG

7EBI	Download File View File

Chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitotetraose.

Kitaoku, Y., Ubonbal, P., Tran, L.T., Robinson, R.C., Suginta, W.

(2021) J Biol Chem 297: 101071-101071

Released	2021-09-08
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Vibrio harveyi 1DA3
Macromolecule	Peptide ABC transporter, periplasmic peptide-binding protein (protein)
Unique Ligands	CA, CL, EDO, MG
Unique branched monosaccharides	NAG

7EBM	Download File View File

W363A mutant of Chitin-specific solute binding protein from Vibrio harveyi in complex with chitobiose.

Kitaoku, Y., Ubonbal, P., Tran, L.T., Robinson, R.C., Suginta, W.

(2021) J Biol Chem 297: 101071-101071

Released	2021-09-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Vibrio harveyi 1DA3
Macromolecule	Peptide ABC transporter, periplasmic peptide-binding protein (protein)
Unique Ligands	CA, CL, EDO, MG
Unique branched monosaccharides	NAG

7EVC	Download File View File

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 60% GTP/40% GDP and 2 Na+

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, GTP, NA

7EVD	Download File View File

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 53% GTP/47% and 2 Na+

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, GTP, NA

7EVE	Download File View File

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 100% GDP and 2 Na+

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, NA

7EVG	Download File View File

Apo Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a psuedo-protofilament arrangement

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	PO4

7EVH	Download File View File

Odinarchaeota tubulin H393D mutant, in a psuedo protofilament arrangement, bound to 59% GDP, 41% phosphate

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, PO4

7EVI	Download File View File

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 79% GTP, 21% GDP, Na+, Mg2+

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, GTP, MG, NA

7EVK	Download File View File

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 78% GTP, 22% GDP, Na+

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, GTP, NA

7EVL	Download File View File

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 64% GTP/36% GDP and 2 Na+ in a small unit cell

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, GTP, NA

7EZB	Download File View File

Thorarchaeota Rab bound to GDP

(2024) Commun Biol 7: 273

Released	2022-06-08
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Candidatus Thorarchaeota archaeon SMTZ1-45
Macromolecule	Thorarchaeota Rab (protein)
Unique Ligands	GDP, MG

7EZD	Download File View File

Thorarchaeota Rab co-crystallized with GTP gamma-S

(2024) Commun Biol 7: 273

Released	2022-06-08
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Candidatus Thorarchaeota archaeon SMTZ1-45
Macromolecule	Chains: A,B (protein)
Unique Ligands	GDP, GSP

7EZE	Download File View File

Thorarchaeota Rab GTP-gamma-S/Mg2+ (soak)

(2024) Commun Biol 7: 273

Released	2022-06-08
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Candidatus Thorarchaeota archaeon SMTZ1-45
Macromolecule	Thorarchaeota Rab (protein)
Unique Ligands	GSP, MG

7F1A	Download File View File

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound 78% GTP/22% GDP 1 K+, 1 Mg2+

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, GTP, K, MG

7F1B	Download File View File

Odinarchaeota tubulin H393D mutant, in a pseudo protofilament arrangement, after GTP hydrolysis and phosphate release

(2022) Sci Adv 8: eabm2225-eabm2225

Released	2022-03-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Candidatus Odinarchaeum yellowstonii
Macromolecule	Tubulin-like protein (protein)
Unique Ligands	GDP, MG

7F8M	Download File View File

Roadblock from Thorarchaeota SMTZ1-45

(2024) Commun Biol 7: 273-273

Released	2022-07-13
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Candidatus Thorarchaeota archaeon SMTZ1-45
Macromolecule	Robl_LC7 domain-containing protein (protein)

7YH1	Download File View File

Roadblock from Candidatus Prometheoarchaeum syntrophicum strain MK-D1

(2024) Commun Biol 7: 273-273

Released	2023-07-19
Method	X-RAY DIFFRACTION 2.69 Å
Organisms	Promethearchaeum syntrophicum
Macromolecule	Roadblock/LC7 domain protein (protein)
Unique Ligands	ZN

7YH2	Download File View File

TRAPPC3 from Thorarchaeota AB25

(2024) Commun Biol 7: 273-273

Released	2023-07-19
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Candidatus Thorarchaeota archaeon AB_25
Macromolecule	TRAPPC3 from Thorarchaeota AB25 (protein)
Unique Ligands	ZN

7YH3	Download File View File

TRAPPC3 from Thorarchaeota SMTZ1-45