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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Zhu, J.P."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Escherichia coli BL21(DE3) (5)
	Escherichia coli (3)
	Kitasatospora (2)
	Streptomyces chartreusis (1)
	synthetic construct (1)

Taxonomy

	Bacteria (11)
	other sequences (1)

Experimental Method

	ELECTRON MICROSCOPY (8)
	X-RAY DIFFRACTION (3)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (1)
	2.5 - 3.0 (5)
	3.0 - 3.5 (2)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

2020 - 2024 (11)

Enzyme Classification Name

Translocases (8)

Membrane Protein Annotation

	PDBTM (8)
	mpstruc (8)
	OPM (4)
	MemProtMD (3)

Symmetry Type

	Asymmetric (9)
	Cyclic (2)

AllSelected

1 to 11 of 11 Structures

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6J31	Download File View File

Crystal Structure Analysis of the Glycotransferase of kitacinnamycin

Shi, J., Liu, C.L., Zhang, B., Guo, W.J., Zhu, J.P., Xu, X., Xu, Q., Jiao, R.H., Tan, R.X., Ge, H.M.

(2019) Chem Sci 10: 4839-4846

Released	2020-01-15
Method	X-RAY DIFFRACTION 2.244 Å
Organisms	Kitasatospora synthetic construct
Macromolecule	DBB-DSG-VAL-MEA-VAL-GLY-GLY-DVA-DLE (protein) kcn28 (protein)
Unique Ligands	BG9

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6J32	Download File View File

Crystal Structure Analysis of the Glycotransferase of kitacinnamycin

Shi, J., Liu, C.L., Zhang, B., Guo, W.J., Zhu, J.P., Xu, X., Xu, Q., Jiao, R.H., Tan, R.X., Ge, H.M.

(2019) Chem Sci 10: 4839-4846

Released	2020-01-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Kitasatospora
Macromolecule	Kcn28 (protein)

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7CUB	Download File View File

2.55-Angstrom Cryo-EM structure of Cytochrome bo3 from Escherichia coli in Native Membrane

Li, J., Han, L., Gennis, R.B., Zhu, J.P., Zhang, K.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-08-25
Method	ELECTRON MICROSCOPY 2.55 Å
Organisms	Escherichia coli
Macromolecule	Cytochrome bo(3) ubiquinol oxidase subunit 1 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 2 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 3 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 4 (protein)
Unique Ligands	3PE, CU, HEM, HEO, UQ8

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7CUQ	Download File View File

2.55-Angstrom Cryo-EM structure of Cytochrome bo3 from Escherichia coli in Native Membrane

Li, J., Han, L., Gennis, R.B., Zhu, J.P., Zhang, K.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-08-25
Method	ELECTRON MICROSCOPY 2.64 Å
Organisms	Escherichia coli
Macromolecule	Cytochrome bo(3) ubiquinol oxidase subunit 1 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 2 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 3 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 4 (protein)
Unique Ligands	3PE, CU, HEM, HEO, UQ8

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7CUW	Download File View File

Ubiquinol Binding Site of Cytochrome bo3 from Escherichia coli

Li, J., Han, L., Gennis, R.B., Zhu, J.P., Zhang, K.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-08-25
Method	ELECTRON MICROSCOPY 2.63 Å
Organisms	Escherichia coli
Macromolecule	Cytochrome bo(3) ubiquinol oxidase subunit 1 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 2 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 3 (protein) Cytochrome bo(3) ubiquinol oxidase subunit 4 (protein)
Unique Ligands	3PE, CU, HEM, HEO, UQ8

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7F02	Download File View File

Cytochrome c-type biogenesis protein CcmABCD from E. coli

Li, J., Zheng, W., Gu, M., Zhang, K., Zhu, J.P.

(2022) Nat Commun 13: 6422-6422

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.24 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	Cytochrome c biogenesis ATP-binding export protein CcmA (protein) Heme exporter protein B (protein) Heme exporter protein C (protein) Heme exporter protein D (protein)
Unique Ligands	3PE, MG, PO4

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7F03	Download File View File

Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with ANP

Li, J., Zheng, W., Gu, M., Zhang, K., Zhu, J.P.

(2022) Nat Commun 13: 6422-6422

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.29 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	Cytochrome c biogenesis ATP-binding export protein CcmA (protein) Heme exporter protein B (protein) Heme exporter protein C (protein) Heme exporter protein D (protein)
Unique Ligands	3PE, ANP, MG

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7F04	Download File View File

Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with Heme and ATP.

Li, J., Zheng, W., Gu, M., Zhang, K., Zhu, J.P.

(2022) Nat Commun 13: 6422-6422

Released	2022-11-09
Method	ELECTRON MICROSCOPY 2.86 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	Cytochrome c biogenesis ATP-binding export protein CcmA (protein) Heme exporter protein B (protein) Heme exporter protein C (protein) Heme exporter protein D (protein)
Unique Ligands	3PE, ATP, HEM, MG

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7VFJ	Download File View File

Cytochrome c-type biogenesis protein CcmABCD

Zhu, J.P., Zhang, K., Li, J., Zheng, W., Gu, M.

(2022) Nat Commun 13: 6422-6422

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.98 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	Cytochrome c biogenesis ATP-binding export protein CcmA (protein) Heme exporter protein B (protein) Heme exporter protein C (protein) Heme exporter protein D (protein)

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7VFP	Download File View File

Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with heme and single ATP

Li, J., Zheng, W., Gu, M., Zhang, K., Zhu, J.P.

(2022) Nat Commun 13: 6422-6422

Released	2022-11-09
Method	ELECTRON MICROSCOPY 4.03 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	Cytochrome c biogenesis ATP-binding export protein CcmA (protein) Heme exporter protein B (protein) Heme exporter protein C (protein) Heme exporter protein D (protein)
Unique Ligands	ATP, HEM, MG

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7WCC	Download File View File

Oxidase ChaP-D49L/Q91C mutant

Sun, M.X., Zheng, W., Wang, Y.S., Zhu, J.P., Tan, R.X.

(2022) Angew Chem Int Ed Engl 61: e202201321-e202201321

Released	2023-05-24
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptomyces chartreusis
Macromolecule	ChaP (protein)
Unique Ligands	FE

1 to 11 of 11 Structures

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