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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Koyama, K."

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Search Summary

This query matches 5 Structures.

Refinements

Structure Determination Methodology

experimental (5)

Scientific Name of Source Organism

	Escherichia coli (5)
	Pseudomonas putida NBRC 14164 (5)
	Escherichia coli BW25113 (4)

Taxonomy

Bacteria (5)

Experimental Method

ELECTRON MICROSCOPY (5)

Polymer Entity Type

	Protein (5)
	RNA (5)

Refinement Resolution (Å)

2.0 - 2.5 (5)

Release Date

2020 - 2024 (5)

Symmetry Type

Asymmetric (5)

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1 to 5 of 5 Structures

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Explore in 3D

8YUO	Download File View File

E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site

Akiyama, N., Ishiguro, K., Shirouzu, M., Suzuki, T.

(2024) Nat Chem Biol

Released	2024-11-06
Method	ELECTRON MICROSCOPY 2.25 Å
Organisms	Escherichia coli Pseudomonas putida NBRC 14164
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 5
Unique Ligands	MG

Explore in 3D

8YUP	Download File View File

E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA

Akiyama, N., Ishiguro, K., Shirouzu, M., Suzuki, T.

(2024) Nat Chem Biol

Released	2024-11-06
Method	ELECTRON MICROSCOPY 2.39 Å
Organisms	Escherichia coli Escherichia coli BW25113 Pseudomonas putida NBRC 14164
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 6
Unique Ligands	MG

Explore in 3D

8YUQ	Download File View File

E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA

Akiyama, N., Ishiguro, K., Shirouzu, M., Suzuki, T.

(2024) Nat Chem Biol

Released	2024-11-06
Method	ELECTRON MICROSCOPY 2.41 Å
Organisms	Escherichia coli Escherichia coli BW25113 Pseudomonas putida NBRC 14164
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 6
Unique Ligands	MG

Explore in 3D

8YUR	Download File View File

E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA

Akiyama, N., Ishiguro, K., Shirouzu, M., Suzuki, T.

(2024) Nat Chem Biol

Released	2024-11-06
Method	ELECTRON MICROSCOPY 2.47 Å
Organisms	Escherichia coli Escherichia coli BW25113 Pseudomonas putida NBRC 14164
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 6
Unique Ligands	MG

Explore in 3D

8YUS	Download File View File

E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA

Akiyama, N., Ishiguro, K., Shirouzu, M., Suzuki, T.

(2024) Nat Chem Biol

Released	2024-11-06
Method	ELECTRON MICROSCOPY 2.43 Å
Organisms	Escherichia coli Escherichia coli BW25113 Pseudomonas putida NBRC 14164
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 6
Unique Ligands	MG

1 to 5 of 5 Structures

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Structure Determination Methodology

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