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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Shkriabai, N."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Human immunodeficiency virus 1 (6)
	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) (3)
	Homo sapiens (2)
	Human immunodeficiency virus type 1 BH10 (1)
	Saccharolobus solfataricus (1)

Taxonomy

	Riboviria (9)
	Eukaryota (2)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (7)
	ELECTRON MICROSCOPY (2)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (10)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (4)
	2.5 - 3.0 (2)
	3.5 - 4.0 (1)
	> 4.5 (1)

Release Date

	2010 - 2014 (5)
	2015 - 2019 (1)
	2020 - 2024 (3)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (2)
	Transferases (2)

Symmetry Type

	Cyclic (8)
	Asymmetric (2)

SCOP Classification

	All alpha proteins (1)
	Alpha and beta proteins (a/b) (4)
	All beta proteins (1)

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1 to 10 of 10 Structures

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2M16	Download File View File

P75/LEDGF PWWP Domain

Crowe, B.L., Foster, M.P.

(2013) Nucleic Acids Res 41: 3924-3936

Released	2013-02-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PC4 and SFRS1-interacting protein (protein)

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4GVM	Download File View File

HIV-1 Integrase Catalytic Core Domain A128T Mutant Complexed with Allosteric Inhibitor

Feng, L., Kvaratskhelia, M.

(2013) J Biol Chem 288: 15813-15820

Released	2013-05-01
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Macromolecule	Gag-Pol polyprotein (protein)
Unique Ligands	ARS, LF2

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4GW6	Download File View File

HIV-1 Integrase Catalytic Core Domain Complexed with Allosteric Inhibitor

Feng, L., Kvaratskhelia, M.

(2013) J Biol Chem 288: 15813-15820

Released	2013-05-01
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Macromolecule	Gag-Pol polyprotein (protein)
Unique Ligands	ARS, LF2

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4JLH	Download File View File

HIV-1 Integrase Catalytic Core Domain A128T Mutant Complexed with Allosteric Inhibitor

Feng, L., Kvaratskhelia, M.

(2013) J Biol Chem 288: 15813-15820

Released	2013-05-01
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Macromolecule	HIV-1 Integrase catalytic core domain (protein)
Unique Ligands	0L9, SO4

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4TSX	Download File View File

HIV-1 Integrase Catalytic Core Domain Mutant Complexed with Allosteric Inhibitor

Feng, L., Kvaratskhelia, M.

(2014) Retrovirology 11: 100-100

Released	2014-12-17
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Integrase (protein)
Unique Ligands	LF0, SO4

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5U1C	Download File View File

Structure of tetrameric HIV-1 Strand Transfer Complex Intasome

Lyumkis, D., Passos, D.

(2017) Science 355: 89-92

Released	2017-01-11
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Homo sapiens Human immunodeficiency virus 1 Saccharolobus solfataricus
Macromolecule	HIV-1 Integrase, Sso7d chimera (protein) DNA (11-MER) (nucleic acid) DNA (23-MER) (nucleic acid) DNA (37-MER) (nucleic acid)
Unique Ligands	MG, ZN

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6VKV	Download File View File

Co-crystal structure of GS-6207 bound to HIV-1 capsid hexamer

Bester, S.M., Kvaratskhelia, M.

(2020) Science 370: 360-364

Released	2020-10-21
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Capsid protein p24 (protein)
Unique Ligands	CL, IOD, QNG

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6VWS	Download File View File

Hexamer of Helical HIV capsid by RASTR method

Zhao, H., Iqbal, N., Asturias, F., Kvaratskhelia, M., Vanblerkom, P.

(2020) Science 370: 360-364

Released	2020-10-21
Method	ELECTRON MICROSCOPY 6.08 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV capsid protein (protein)

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7SNQ	Download File View File

Hexamer HIV-1 CA in complex with CPSF6 peptide and IP6 ligand

Bester, S.M., Kvaratskhelia, M.

(2022) Nat Commun 13: 5879-5879

Released	2022-09-07
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Human immunodeficiency virus 1 Human immunodeficiency virus type 1 BH10
Macromolecule	Capsid protein p24 (protein) Cleavage and polyadenylation specificity factor subunit 6 (protein)
Unique Ligands	CL, IHP

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8V23	Download File View File

Crystal structure of HIV-1 capsid N-terminal domain in the presence of Lenacapavir

Briganti, L., Kvaratskhelia, M.

(2024) bioRxiv

Released	2025-01-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Capsid protein p24 (protein)

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