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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Bacillus anthracis str. Ames (7)
	Escherichia coli (7)
	Listeria monocytogenes EGD-e (2)
	Thioalkalivibrio paradoxus (2)
	Streptococcus pneumoniae (1)
	Streptococcus pneumoniae TIGR4 (1)

Taxonomy

Bacteria (20)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (9)
	2.0 - 2.5 (5)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (19)

Enzyme Classification Name

	Oxidoreductases (2)
	Hydrolases (1)

Symmetry Type

	Cyclic (17)
	Asymmetric (2)
	Dihedral (2)

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1 to 20 of 20 Structures

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3GJZ	Download File View File

Crystal structure of microcin immunity protein MccF from Bacillus anthracis str. Ames

Nocek, B., Zhou, M., Kwon, K., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2012) J Mol Biol 420: 366-383

Released	2009-04-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bacillus anthracis str. Ames
Macromolecule	Microcin immunity protein MccF (protein)

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3SR3	Download File View File

Crystal structure of the w180a mutant of microcin immunity protein mccf from Bacillus anthracis shows the active site loop in the open conformation.

Nocek, B., Zhou, M., Gu, M., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2012) J Mol Biol 420: 366-383

Released	2011-08-10
Method	X-RAY DIFFRACTION 1.495 Å
Organisms	Bacillus anthracis str. Ames
Macromolecule	Microcin immunity protein MccF (protein)

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3SXQ	Download File View File

Structure of a hexameric multiheme c nitrite reductase from the extremophile bacterium Thiolkalivibrio paradoxus

Polyakov, K.M., Trofimov, A.A., Tikhonova, T.V., Tikhonov, A.V., Boyko, K.M., Popov, V.O.

(2012) FEBS J 279: 4052-4061

Released	2012-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thioalkalivibrio paradoxus
Macromolecule	Eight-heme nitrite reductase (protein)
Unique Ligands	CA, CL, CO, GOL, HEC, NA, SO4

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3T5M	Download File View File

Crystal structure of the S112A mutant of mycrocine immunity protein (MccF) with AMP

Nocek, B., Zhou, M., Gu, M., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2012) J Mol Biol 420: 366-383

Released	2011-09-07
Method	X-RAY DIFFRACTION 1.749 Å
Organisms	Bacillus anthracis str. Ames
Macromolecule	Microcin immunity protein MccF (protein)
Unique Ligands	AMP, GOL

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3TLA	Download File View File

Microcin C7 self immunity protein MccF in the wild type APO state

Agarwal, V., Nair, S.K.

(2012) Proc Natl Acad Sci U S A 109: 4425-4430

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.201 Å
Organisms	Escherichia coli
Macromolecule	MccF (protein)
Unique Ligands	EDO

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3TLB	Download File View File

Microcin C7 self immunity protein MccF in complex aspartyl sulfamoyl adenosine

Agarwal, V., Nair, S.K.

(2012) Proc Natl Acad Sci U S A 109: 4425-4430

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.501 Å
Organisms	Escherichia coli
Macromolecule	MccF (protein)
Unique Ligands	DSZ

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3TLC	Download File View File

Microcin C7 self immunity protein MccF in complex with Microcin C7 antibiotic

Agarwal, V., Nair, S.K.

(2012) Proc Natl Acad Sci U S A 109: 4425-4430

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Escherichia coli
Macromolecule	MccF (protein)
Unique Ligands	7MD, EDO

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3TLE	Download File View File

Microcin C7 self immunity protein MccF in complex with glutamyl sulfamoyl adenylate

Agarwal, V., Nair, S.K.

(2012) Proc Natl Acad Sci U S A 109: 4425-4430

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Escherichia coli
Macromolecule	MccF (protein)
Unique Ligands	EDO, GSU

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3TLG	Download File View File

Microcin C7 self immunity protein MccF in the inactive mutant APO state

Agarwal, V., Nair, S.K.

(2012) Proc Natl Acad Sci U S A 109: 4425-4430

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.4993 Å
Organisms	Escherichia coli
Macromolecule	MccF (protein)

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3TLY	Download File View File

Microcin C7 self immunity protein MccF active site mutant S118A/N220A/K247A in the apo state

Agarwal, V., Nair, S.K.

(2012) Proc Natl Acad Sci U S A 109: 4425-4430

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	MccF (protein)
Unique Ligands	EDO

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3TLZ	Download File View File

Microcin C7 self immunity protein MccF mutant W186F in complex with Adenosine Monophosphate

Agarwal, V., Nair, S.K.

(2012) Proc Natl Acad Sci U S A 109: 4425-4430

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	MccF (protein)
Unique Ligands	AMP, EDO

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3TTB	Download File View File

Structure of the Thioalkalivibrio paradoxus cytochrome c nitrite reductase in complex with sulfite

Polyakov, K.M., Trofimov, A.A., Tikhonova, T.V., Tikhonov, A.V., Dorovatovskii, P.V., Popov, V.O.

(2012) FEBS J 279: 4052-4061

Released	2011-10-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thioalkalivibrio paradoxus
Macromolecule	Eight-heme nitrite reductase (protein)
Unique Ligands	CA, CO, GOL, HEC, SO3, SO4

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3TYX	Download File View File

Crystal structure of the F177S mutant of mycrocine immunity protein (MccF) with AMP

Nocek, B., Gu, M., Zhou, M., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2012) J Mol Biol 420: 366-383

Released	2011-12-28
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Bacillus anthracis str. Ames
Macromolecule	Microcin immunity protein MccF (protein)
Unique Ligands	AMP

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3U1B	Download File View File

Crystal structure of the S238R mutant of mycrocine immunity protein (MccF) with AMP

Nocek, B., Gu, M., Zhou, M., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2012) J Mol Biol 420: 366-383

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.604 Å
Organisms	Bacillus anthracis str. Ames
Macromolecule	Microcin immunity protein MccF (protein)
Unique Ligands	AMP

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4E5S	Download File View File

Crystal structure of MccFlike protein (BA_5613) from Bacillus anthracis str. Ames

Nocek, B., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.952 Å
Organisms	Bacillus anthracis str. Ames
Macromolecule	MccFlike protein (BA_5613) (protein)
Unique Ligands	GOL

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4E94	Download File View File

Crystal structure of MccF-like protein from Streptococcus pneumoniae

Nocek, B., Tikhonov, A., Kwon, K., Severinov, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2012-05-09
Method	X-RAY DIFFRACTION 1.651 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	MccC family protein (protein)
Unique Ligands	GOL, SO4

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4EYS	Download File View File

Crystal structure of MccF-like protein from Streptococcus pneumoniae in complex with AMP

Nocek, B., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2012-07-18
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Streptococcus pneumoniae
Macromolecule	MccC family protein (protein)
Unique Ligands	ACT, AMP, SO4

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4H1H	Download File View File

Crystal structure of MccF homolog from Listeria monocytogenes EGD-e

Nocek, B., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2012-09-26
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Listeria monocytogenes EGD-e
Macromolecule	Lmo1638 protein (protein)
Unique Ligands	SO4

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4INJ	Download File View File

Crystal structure of the S111A mutant of member of MccF clade from Listeria monocytogenes EGD-e with product

Nocek, B., Tikhonov, A., Severinov, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2013-02-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Listeria monocytogenes EGD-e
Macromolecule	Lmo1638 protein (protein)
Unique Ligands	GOL, LMS, MG, PEG

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4JVO	Download File View File

Crystal structure of the double mutant (S112A, H303A) of B.anthracis mycrocine immunity protein (MccF) with alanyl sulfamoyl adenylates

Nocek, B., Tikhonov, A., Severinov, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2013-06-12
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Bacillus anthracis str. Ames
Macromolecule	Microcin immunity protein MccF (protein)
Unique Ligands	A5A, GOL