QUERY: Scientific Name of the Source Organism = "Escherichia coli 1303"
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Search Summary This query matches 28 Polymer Entities.
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Structure Determination Methodology
Scientific Name of Source Organism
Taxonomy
Experimental Method
Polymer Entity Type
Refinement Resolution (Å)
Release Date
Enzyme Classification Name
Symmetry Type
SCOP Classification
1 to 25 of 28 Polymer Entities
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2A3M: Entity 1

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Structure of Desulfovibrio desulfuricans G20 tetraheme cytochrome (oxidized form)

Pattarkine, M.V., Tanner, J.J., Bottoms, C.A., Lee, Y.H., Wall, J.D.

(2006) J Mol Biol 358: 1314-1327

Released2006-04-25
Method
X-RAY DIFFRACTION 1.5 Å
Chain IDA
Organism
MacromoleculeCOG3005: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit
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2A3P: Entity 1

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Structure of Desulfovibrio desulfuricans G20 tetraheme cytochrome with bound molybdate

Pattarkine, M.V., Lee, Y.-H., Tanner, J.J., Wall, J.D.

(2006) J Mol Biol 358: 1314-1327

Released2006-04-18
Method
X-RAY DIFFRACTION 2.3 Å
Chain IDA
Organism
MacromoleculeCOG3005: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit
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2Q30: Entity 1

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Crystal structure of a rmlc-like cupin protein (dde_2303) from desulfovibrio desulfuricans subsp. at 1.94 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released2007-06-19
Method
X-RAY DIFFRACTION 1.94 Å
Chain IDsA, B, C, D, E
Organism
MacromoleculeUncharacterized protein
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2R7H: Entity 1

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CRYSTAL STRUCTURE OF A putative acetyltransferase of the GNAT family (DDE_3044) FROM DESULFOVIBRIO DESULFURICANS SUBSP. AT 1.85 A RESOLUTION

Joint Center for Structural Genomics (JCSG)

To be published

Released2007-09-25
Method
X-RAY DIFFRACTION 1.85 Å
Chain IDsA, B
Organism
MacromoleculePutative D-alanine N-acetyltransferase of GNAT family
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2RB7: Entity 1

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Crystal structure of co-catalytic metallopeptidase (YP_387682.1) from Desulfovibrio desulfuricans G20 at 1.60 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released2007-10-02
Method
X-RAY DIFFRACTION 1.6 Å
Chain IDsA, B
Organism
MacromoleculePeptidase, M20/M25/M40 family
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3C8V: Entity 1

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Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released2008-02-26
Method
X-RAY DIFFRACTION 2.28 Å
Chain IDsA, B, C, D
Organism
MacromoleculePutative acetyltransferase
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3CG0: Entity 1

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Crystal structure of signal receiver domain of modulated diguanylate cyclase from Desulfovibrio desulfuricans G20, an example of alternate folding

Patskovsky, Y., Bonanno, J.B., Romero, R., Gilmore, M., Chang, S., Groshong, C., Koss, J., Wasserman, S.R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released2008-03-18
Method
X-RAY DIFFRACTION 2.15 Å
Chain IDsA, B, C, D
Organism
MacromoleculeResponse regulator receiver modulated diguanylate cyclase with PAS/PAC sensor
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3CGX: Entity 1

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Crystal structure of putative nucleotide-diphospho-sugar transferase (YP_389115.1) from Desulfovibrio desulfuricans G20 at 1.90 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released2008-03-18
Method
X-RAY DIFFRACTION 1.9 Å
Chain IDA
Organism
MacromoleculePutative nucleotide-diphospho-sugar transferase
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3E39: Entity 1

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Crystal structure of a putative nitroreductase in complex with fmn (dde_0787) from desulfovibrio desulfuricans subsp. at 1.70 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released2008-08-19
Method
X-RAY DIFFRACTION 1.7 Å
Chain IDsA, B
Organism
MacromoleculePutative Nitroreductase
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3EJK: Entity 1

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Crystal structure of dTDP Sugar Isomerase (YP_390184.1) from DESULFOVIBRIO DESULFURICANS G20 at 1.95 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released2008-09-30
Method
X-RAY DIFFRACTION 1.95 Å
Chain IDA
Organism
MacromoleculedTDP Sugar Isomerase
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3HM4: Entity 1

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CRYSTAL STRUCTURE OF A CHEMOTAXIS PROTEIN CHEX (DDE_0281) FROM DESULFOVIBRIO DESULFURICANS SUBSP. AT 1.30 A RESOLUTION

Joint Center for Structural Genomics (JCSG)

To be published

Released2009-06-23
Method
X-RAY DIFFRACTION 1.3 Å
Chain IDsA, B
Organism
MacromoleculeChemotaxis protein CheX
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4NAP: Entity 1

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Crystal structure of a trap periplasmic solute binding protein from Desulfovibrio alaskensis G20 (DDE_0634), target EFI-510102, with bound d-tryptophan

Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

(2015) Biochemistry 54: 909-931

Released2013-11-13
Method
X-RAY DIFFRACTION 2.3 Å
Chain IDsC, D, A, B
Organism
MacromoleculeExtracellular solute-binding protein, family 7
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4NGU: Entity 1

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Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio alaskensis G20 (Dde_1548), Target EFI-510103, with bound D-Ala-D-Ala

Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

(2015) Biochemistry 54: 909-931

Released2013-12-04
Method
X-RAY DIFFRACTION 2.5 Å
Chain IDA
Organism
MacromoleculeTRAP dicarboxylate transporter, DctP subunit
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4PGN: Entity 1

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CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND INDOLE PYRUVATE

Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

(2015) Biochemistry 54: 909-931

Released2014-05-28
Method
X-RAY DIFFRACTION 1.8 Å
Chain IDsA, B, C, D
Organism
MacromoleculeExtracellular solute-binding protein, family 7
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4PGP: Entity 1

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CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID

Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

(2015) Biochemistry 54: 909-931

Released2014-06-18
Method
X-RAY DIFFRACTION 2.25 Å
Chain IDsA, B, C, D
Organism
MacromoleculeExtracellular solute-binding protein, family 7
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4RGL: Entity 1

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Crystal structure of a Fic family protein (Dde_2494) from Desulfovibrio desulfuricans G20 at 2.70 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released2014-10-29
Method
X-RAY DIFFRACTION 2.7 Å
Chain IDA
Organism
MacromoleculeFilamentation induced by cAMP protein Fic
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5FAU: Entity 1

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wild-type choline TMA lyase in complex with choline

Funk, M.A., Drennan, C.L.

(2016) Cell Chem Biol 23: 1206-1216

Released2016-09-28
Method
X-RAY DIFFRACTION 1.9 Å
Chain IDsA, B, C, D
Organism
MacromoleculeCholine trimethylamine-lyase
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5FAV: Entity 1

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E491Q mutant of choline TMA-lyase

Funk, M.A., Drennan, C.L.

(2016) Cell Chem Biol 23: 1206-1216

Released2016-09-28
Method
X-RAY DIFFRACTION 1.6 Å
Chain IDsA, B
Organism
MacromoleculeCholine trimethylamine-lyase
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5FAW: Entity 1

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T502A mutant of choline TMA-lyase

Funk, M.A., Drennan, C.L.

(2016) Cell Chem Biol 23: 1206-1216

Released2016-09-28
Method
X-RAY DIFFRACTION 1.852 Å
Chain IDsA, B
Organism
MacromoleculeCholine trimethylamine-lyase
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5FAY: Entity 1

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Y208F mutant of choline TMA-lyase

Funk, M.A., Drennan, C.L.

(2016) Cell Chem Biol 23: 1206-1216

Released2016-09-28
Method
X-RAY DIFFRACTION 1.901 Å
Chain IDsA, B
Organism
MacromoleculeCholine trimethylamine-lyase
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5KDP: Entity 1

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E491A mutant of choline TMA-lyase

Funk, M.A., Drennan, C.L.

(2016) Cell Chem Biol 23: 1206-1216

Released2016-09-28
Method
X-RAY DIFFRACTION 1.9 Å
Chain IDsA, B [auth C]
Organism
MacromoleculeCholine trimethylamine-lyase
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5MY5: Entity 1

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Tungstate binding protein - TupA - from Desulfovibrio alaskensis G20

Otrelo-Cardoso, A.R., Correia, M.A.S.C., Santos-Silva, T.

(2017) Sci Rep 7: 5798-5798

Released2017-08-02
Method
X-RAY DIFFRACTION 1.4 Å
Chain IDA
Organism
MacromoleculeABC transporter periplasmic substrate-binding protein
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6ND3: Entity 1

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wild-type choline TMA lyase in complex with betaine aldehyde

Funk, M.A., Drennan, C.L.

(2019) J Am Chem Soc 141: 33-37

Released2019-01-16
Method
X-RAY DIFFRACTION 2.364 Å
Chain IDsA, B, C, D, F
Organism
MacromoleculeCholine trimethylamine-lyase
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6VUE: Entity 1

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wild-type choline TMA lyase in complex with 1-methyl-1,2,3,6-tetrahydropyridin-3-ol

Ortega, M.A., Drennan, C.L.

(2020) ACS Med Chem Lett 11: 1980-1985

Released2020-11-04
Method
X-RAY DIFFRACTION 2.28 Å
Chain IDsA, B
Organism
MacromoleculeCholine trimethylamine-lyase
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8T9T: Entity 1

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Apo Crystal Structure of a Substrate Binding Protein (IseP) from an Isethionate TRAP Transporter

Newton-Vesty, M.C., Dobson, R.C.J.

(2024) Biochem J 481: 1901-1920

Released2024-06-26
Method
X-RAY DIFFRACTION 1.48 Å
Chain IDA
Organism
MacromoleculeIsethionate-binding periplasmic protein DctP
1 to 25 of 28 Polymer Entities
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