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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "Cgl2189"

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Bat SARS-like coronavirus WIV1 (3)
	Enterobacteria phage T6 (3)
	Homo sapiens (2)
	Sus scrofa (2)
	Bat SARS-like coronavirus RsSHC014 (1)
	Bat coronavirus RaTG13 (1)
	Chlorocebus aethiops (1)
	Listeria monocytogenes (1)
	Pangolin coronavirus (1)
	Rhinolophus bat coronavirus HKU2 (1)

More...

Taxonomy

	Riboviria (8)
	Eukaryota (7)
	Duplodnaviria (3)
	Bacteria (2)

Experimental Method

	ELECTRON MICROSCOPY (10)
	X-RAY DIFFRACTION (6)

Polymer Entity Type

Protein (16)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (3)
	2.5 - 3.0 (5)
	3.0 - 3.5 (2)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (4)
	2020 - 2024 (11)

Enzyme Classification Name

	Hydrolases (1)
	Transferases (1)

Membrane Protein Annotation

	MemProtMD (1)
	OPM (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (9)
	Cyclic (7)

SCOP Classification

	Artifacts (3)
	Alpha and beta proteins (a+b) (4)

AllSelected

1 to 16 of 16 Structures

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4Q35	Download File View File

Structure of a membrane protein

Huang, Y., Qiao, S., Luo, Q., Zhao, Y.

(2014) Nature 511: 108-111

Released	2014-06-25
Method	X-RAY DIFFRACTION 2.393 Å
Organisms	Shigella flexneri
Macromolecule	LPS-assembly lipoprotein LptE (protein) LPS-assembly protein LptD (protein)
Unique Ligands	C8E, LDA, SO4

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5HRJ	Download File View File

Crystal structure of the scavenger receptor cysteine-rich domain 5 (SRCR5) from porcine CD163

Ma, H., Jiang, L., Qiao, S., Zhang, G., Li, R.

To be published

Released	2017-07-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	Scavenger receptor cysteine-rich type 1 protein M130 (protein)

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5JFB	Download File View File

Crystal structure of the scavenger receptor cysteine-rich domain 5 (SRCR5) from porcine CD163

Ma, H., Jiang, L., Qiao, S., Zhang, G., Li, R.

(2017) J Virol 91:

Released	2017-03-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Sus scrofa
Macromolecule	Scavenger receptor cysteine-rich type 1 protein M130 (protein)

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6K0L	Download File View File

The crystal structure of simian CD163 SRCR5

Ma, H., Li, R., Jiang, L., Qiao, S., Zhang, G.

(2021) Vet Res 52: 97-97

Released	2020-05-13
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Chlorocebus aethiops
Macromolecule	Scavenger receptor cysteine-rich type 1 protein M130 (protein)

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6K0O	Download File View File

The crystal structure of human CD163-like homolog SRCR8

Ma, H., Li, R., Jiang, L., Qiao, S., Zhang, G.

(2021) Vet Res 52: 97-97

Released	2020-05-13
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Homo sapiens
Macromolecule	Scavenger receptor cysteine-rich type 1 protein M160 (protein)

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6M15	Download File View File

Cryo-EM structures of HKU2 spike glycoproteins

Wang, X., Yu, J., Qiao, S., Guo, R.

(2020) Nat Commun 11: 3070-3070

Released	2020-05-27
Method	ELECTRON MICROSCOPY 2.38 Å
Organisms	Rhinolophus bat coronavirus HKU2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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6M16	Download File View File

Cryo-EM structures of SADS-CoV spike glycoproteins

Wang, X., Yu, J., Qiao, S., Guo, R.

(2020) Nat Commun 11: 3070-3070

Released	2020-05-27
Method	ELECTRON MICROSCOPY 2.83 Å
Organisms	Swine acute diarrhea syndrome coronavirus
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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6R2M	Download File View File

Crystal structure of PssZ from Listeria monocytogenes

Wu, H., Cheng, J., Qiao, S., Li, D., Ma, L.

(2019) Acta Crystallogr F Struct Biol Commun 75: 501-506

Released	2019-07-24
Method	X-RAY DIFFRACTION 1.617 Å
Organisms	Listeria monocytogenes
Macromolecule	Glycoside transferase (protein)

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6SWY	Download File View File

Structure of active GID E3 ubiquitin ligase complex minus Gid2 and delta Gid9 RING domain

Qiao, S., Prabu, J.R., Schulman, B.A.

(2020) Mol Cell 77: 1-14

Released	2019-11-20
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Glucose-induced degradation protein 8 (protein) Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10 (protein) Vacuolar import and degradation protein 24 (protein) Vacuolar import and degradation protein 28 (protein) Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30 (protein)

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7CN4	Download File View File

Cryo-EM structure of bat RaTG13 spike glycoprotein

Wang, X., Zhang, S., Qiao, S., Yu, J., Zeng, J., Tian, L.

(2021) Nat Commun 12: 1607-1607

Released	2021-03-03
Method	ELECTRON MICROSCOPY 2.93 Å
Organisms	Bat coronavirus RaTG13
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7CN8	Download File View File

Cryo-EM structure of PCoV_GX spike glycoprotein

Wang, X., Yu, J., Zhang, S., Qiao, S., Zeng, J., Tian, L.

(2021) Nat Commun 12: 1607-1607

Released	2021-03-03
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Pangolin coronavirus
Macromolecule	Glycoprotein (protein)
Unique Ligands	EIC, NAG
Unique branched monosaccharides	NAG

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7WUG	Download File View File

GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module

Qiao, S., Cheng, J.D., Schulman, B.A.

(2022) Nat Commun 13: 3041-3041

Released	2022-06-08
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae YJM1133
Macromolecule	Glucose-induced degradation protein 8 (protein) HLJ1_G0042170.mRNA.1.CDS.1 (protein) Vacuolar import and degradation protein 24 (protein) Vacuolar import and degradation protein 28 (protein) Vacuolar import and degradation protein 30 (protein)

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8WLU	Download File View File

Cryo-EM structure of bat RsSHC014 spike glycoprotein

Wang, X., Qiao, S.

(2024) J Virol 98: e0034224-e0034224

Released	2024-07-17
Method	ELECTRON MICROSCOPY 2.87 Å
Organisms	Bat SARS-like coronavirus RsSHC014 Enterobacteria phage T6
Macromolecule	Spike glycoprotein,Fibritin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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8WLY	Download File View File

Cryo-EM structure of bat WIV1 spike glycoprotein

Wang, X., Qiao, S.

(2024) J Virol 98: e0034224-e0034224

Released	2024-07-17
Method	ELECTRON MICROSCOPY 3.96 Å
Organisms	Bat SARS-like coronavirus WIV1 Enterobacteria phage T6
Macromolecule	Spike glycoprotein,Fibritin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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8WLZ	Download File View File

Cryo-EM structure of the WIV1 S-hACE2 complex

Wang, X., Qiao, S.

(2024) J Virol 98: e0034224-e0034224

Released	2024-07-17
Method	ELECTRON MICROSCOPY 4.45 Å
Organisms	Bat SARS-like coronavirus WIV1 Enterobacteria phage T6 Homo sapiens
Macromolecule	Processed angiotensin-converting enzyme 2 (protein) Spike glycoprotein,Fibritin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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8WQ0	Download File View File

Cryo-EM structure of WIV1 spike glycoprotein (the closed state)

Wang, X., Qiao, S.

(2024) J Virol 98: e0034224-e0034224

Released	2024-07-17
Method	ELECTRON MICROSCOPY 2.78 Å
Organisms	Bat SARS-like coronavirus WIV1
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

1 to 16 of 16 Structures

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