RCSB PDB: Search

1B1Y	Download File View File

SEVENFOLD MUTANT OF BARLEY BETA-AMYLASE

Mikami, B., Yoon, H.J., Yoshigi, N.

(1999) J Mol Biol 285: 1235-1243

Released	1998-12-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Hordeum vulgare
Macromolecule	PROTEIN (BETA-AMYLASE) (protein)
Unique Ligands	BGC
Unique branched monosaccharides	BGC, GLC

1I5S	Download File View File

CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-ADP

Kikkawa, M., Sablin, E.P., Okada, Y., Yajima, H., Fletterick, R.J., Hirokawa, N.

(2001) Nature 411: 439-445

Released	2001-05-30
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	KINESIN-LIKE PROTEIN KIF1A (protein)
Unique Ligands	ADP, MG

1I6I	Download File View File

CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP

Kikkawa, M., Sablin, E.P., Okada, Y., Yajima, H., Fletterick, R.J., Hirokawa, N.

(2001) Nature 411: 439-445

Released	2001-05-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	KINESIN-LIKE PROTEIN KIF1A (protein)
Unique Ligands	ACP, MG, TRS

1IA0	Download File View File

KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM

Kikkawa, M., Sablin, E.P., Okada, Y., Yajima, H., Fletterick, R.J., Hirokawa, N.

(2001) Nature 411: 439-445

Released	2002-03-22
Method	ELECTRON MICROSCOPY 15 Å
Organisms	Mus musculus Sus scrofa
Macromolecule	KINESIN-LIKE PROTEIN KIF1A (protein) TUBULIN ALPHA CHAIN (protein) TUBULIN BETA CHAIN (protein)
Unique Ligands	ACP, GDP, GTP, MG, TXL

1PIP	Download File View File

CRYSTAL STRUCTURE OF PAPAIN-SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE COMPLEX AT 1.7 ANGSTROMS RESOLUTION: NONCOVALENT BINDING MODE OF A COMMON SEQUENCE OF ENDOGENOUS THIOL PROTEASE INHIBITORS

Yamamoto, A., Tomoo, K., Doi, M., Ohishi, H., Inoue, M., Ishida, T., Yamamoto, D., Tsuboi, S., Okamoto, H., Okada, Y.

(1992) Biochemistry 31: 11305-11309

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Carica papaya
Macromolecule	Papain (protein) SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE (protein)

1V8J	Download File View File

The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-ADP

Ogawa, T., Nitta, R., Okada, Y., Hirokawa, N.

(2004) Cell 116: 591-602

Released	2004-03-02
Method	X-RAY DIFFRACTION 3.24 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF2C (protein)
Unique Ligands	ADP, MG

1V8K	Download File View File

The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-AMPPNP

Ogawa, T., Nitta, R., Okada, Y., Hirokawa, N.

(2004) Cell 116: 591-602

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF2C (protein)
Unique Ligands	ANP, MG

1VFV	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ANP, MG

1VFW	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ANP, MG

1VFX	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-AlFx

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ADP, AF3, MG, TRS

1VFZ	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-VO4

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ADP, MG, VO4

2ZFI	Download File View File

Crystal Structure of the Kif1A Motor Domain Before Mg Release

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP, MG

2ZFJ	Download File View File

Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-1

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP, MG

2ZFK	Download File View File

Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-2

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 3.61 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP, MG, TRS

2ZFL	Download File View File

Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-3

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP

2ZFM	Download File View File

Crystal Structure of the Kif1A Motor Domain After Mg Release

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP

3J7I	Download File View File

Structure of alpha- and beta- tubulin in GMPCPP-microtubules

Yajima, H., Ogura, T., Nitta, R., Okada, Y., Sato, C., Hirokawa, N.

(2012) J Cell Biol 198: 315-322

Released	2014-12-10
Method	ELECTRON MICROSCOPY 8.9 Å
Organisms	Sus scrofa
Macromolecule	Tubulin alpha-1A chain (protein) Tubulin beta chain (protein)
Unique Ligands	GTP, MG

5B1L	Download File View File

The mouse nucleosome structure containing H3t

Urahama, T., Machida, S., Horikoshi, N., Osakabe, A., Tachiwana, H., Taguchi, H., Kurumizaka, H.

(2017) Cell Rep 18: 593-600

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Histone H2A type 1 (protein) Histone H2B type 3-A (protein) Histone H3t (protein) Histone H4 (protein) DNA (146-MER) (nucleic acid)
Unique Ligands	CL, MN

5B1M	Download File View File

The mouse nucleosome structure containing H3.1

Urahama, T., Machida, S., Horikoshi, N., Osakabe, A., Tachiwana, H., Taguchi, H., Kurumizaka, H.

(2017) Cell Rep 18: 593-600

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.34 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Histone H2A type 1 (protein) Histone H2B type 3-A (protein) Histone H3.1 (protein) Histone H4 (protein) DNA (146-MER) (nucleic acid)

5XXT	Download File View File

GDP-microtubule complexed with nucleotide-free KIF5C

Morikawa, M., Shigematsu, H., Nitta, R., Hirokawa, N.

(2018) J Cell Biol 217: 4164-4183

Released	2018-10-10
Method	ELECTRON MICROSCOPY 5.35 Å
Organisms	Sus scrofa
Macromolecule	Tubulin alpha-1A chain (protein) Tubulin beta chain (protein)
Unique Ligands	GDP, GTP, MG

5XXV	Download File View File

GDP-microtubule complexed with KIF5C in AMPPNP state

Morikawa, M., Shigematsu, H., Nitta, R., Hirokawa, N.

(2018) J Cell Biol 217: 4164-4183

Released	2018-10-10
Method	ELECTRON MICROSCOPY 6.46 Å
Organisms	Sus scrofa
Macromolecule	Tubulin alpha-1A chain (protein) Tubulin beta chain (protein)
Unique Ligands	GDP, GTP, MG

5XXW	Download File View File

GDP-microtubule complexed with KIF5C in ATP state

Morikawa, M., Shigematsu, H., Nitta, R., Hirokawa, N.

(2018) J Cell Biol 217: 4164-4183

Released	2018-10-10
Method	ELECTRON MICROSCOPY 6 Å
Organisms	Sus scrofa
Macromolecule	Tubulin alpha-1A chain (protein) Tubulin beta chain (protein)
Unique Ligands	GDP, GTP, MG

5XXX	Download File View File

GMPCPP-microtubule complexed with nucleotide-free KIF5C

Morikawa, M., Shigematsu, H., Nitta, R., Hirokawa, N.

(2018) J Cell Biol 217: 4164-4183

Released	2018-10-10
Method	ELECTRON MICROSCOPY 6.43 Å
Organisms	Sus scrofa
Macromolecule	Tubulin alpha-1A chain (protein) Tubulin beta chain (protein)
Unique Ligands	G2P, GTP, MG

6M04	Download File View File

Structure of the human homo-hexameric LRRC8D channel at 4.36 Angstroms

Nakamura, R., Kasuya, G., Yokoyama, T., Shirouzu, M., Ishitani, R., Nureki, O.

(2020) Commun Biol 3: 240-240

Released	2020-06-17
Method	ELECTRON MICROSCOPY 4.36 Å
Organisms	Homo sapiens
Macromolecule	Volume-regulated anion channel subunit LRRC8D (protein)