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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "PDK4"

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Meleagris gallopavo (11)
	Streptomyces griseus (10)
	Homo sapiens (2)
	Haemophilus influenzae 86-028NP (1)
	Schizosaccharomyces pombe (1)
	Sus scrofa (1)

Taxonomy

	Eukaryota (15)
	Bacteria (11)

Experimental Method

X-RAY DIFFRACTION (16)

Polymer Entity Type

Protein (16)

Refinement Resolution (Å)

	1.5 - 2.0 (13)
	2.0 - 2.5 (1)
	2.5 - 3.0 (2)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (8)
	2005 - 2009 (6)
	2010 - 2014 (1)

Enzyme Classification Name

	Hydrolases (13)
	Transferases (1)

Membrane Protein Annotation

	MemProtMD (1)
	OPM (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (13)
	Cyclic (4)

SCOP Classification

	Small proteins (11)
	All beta proteins (10)
	Alpha and beta proteins (a/b) (2)
	Alpha and beta proteins (a+b) (3)
	Artifacts (1)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 16 of 16 Structures

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1CSO	Download File View File

CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-ILE18I IN COMPLEX WITH SGPB

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.G.

(2000) Protein Sci 9: 83-94

Released	2000-01-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	OVOMUCOID INHIBITOR (protein) PROTEINASE B (protein)

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1CT0	Download File View File

CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-SER18I IN COMPLEX WITH SGPB

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.G.

(2000) Protein Sci 9: 83-94

Released	2000-01-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	OVOMUCOID INHIBITOR (protein) PROTEINASE B (protein)

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1CT2	Download File View File

CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-THR18I IN COMPLEX WITH SGPB

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.

(2000) Protein Sci 9: 83-94

Released	2000-01-12
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	OVOMUCOID INHIBITOR (protein) PROTEINASE B (protein)

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1CT4	Download File View File

CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-VAL18I IN COMPLEX WITH SGPB

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.G.

(2000) Protein Sci 9: 83-94

Released	2000-01-12
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	OVOMUCOID INHIBITOR (protein) PROTEINASE B (protein)

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1DS2	Download File View File

CRYSTAL STRUCTURE OF SGPB:OMTKY3-COO-LEU18I

Bateman, K.S., Huang, K., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.G.

(2001) J Mol Biol 305: 839-849

Released	2001-01-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	OVOMUCOID (protein) PROTEINASE B (SGPB) (protein)

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1DS3	Download File View File

CRYSTAL STRUCTURE OF OMTKY3-CH2-ASP19I

Bateman, K.S., Huang, K., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.G.

(2001) J Mol Biol 305: 839-849

Released	2001-01-31
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Meleagris gallopavo
Macromolecule	OVOMUCOID (protein)

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1JK7	Download File View File

CRYSTAL STRUCTURE OF THE TUMOR-PROMOTER OKADAIC ACID BOUND TO PROTEIN PHOSPHATASE-1

Maynes, J.T., Bateman, K.S., Cherney, M.M., Das, A.K., James, M.N.

(2001) J Biol Chem 276: 44078-44082

Released	2001-08-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	SERINE/THREONINE PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT (protein)
Unique Ligands	BME, MN, OKA, SO4

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1M3E	Download File View File

Succinyl-COA:3-ketoacid COA transferase from pig heart (selenomethionine)

Bateman, K.S., Brownie, E.R., Wolodko, W.T., Fraser, M.E.

(2002) Biochemistry 41: 14455-14462

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Sus scrofa
Macromolecule	SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE (protein)

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1PUC	Download File View File

P13SUC1 IN A STRAND-EXCHANGED DIMER

Khazanovich, N., Bateman, K.S., Chernaia, M., Michalak, M., James, M.N.G.

(1996) Structure 4: 299-309

Released	1996-04-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Schizosaccharomyces pombe
Macromolecule	P13SUC1 (protein)
Unique Ligands	CPS

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2NR9	Download File View File

Crystal structure of GlpG, Rhomboid Peptidase from Haemophilus influenzae

Lemieux, M.J., Fischer, S.J., Cherney, M.M., Bateman, K.S., James, M.N.G.

(2007) Proc Natl Acad Sci U S A 104: 750-754

Released	2006-11-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Haemophilus influenzae 86-028NP
Macromolecule	Protein glpG homolog (protein)
Unique Ligands	PA6, PQE

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2NU0	Download File View File

Molecular structures of the complexes of SGPB with OMTKY3 aromatic P1 variants Trp18I, His18I, Phe18I, and Tyr18I

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Huang, K., Laskowski Jr., M., James, M.N.G.

To be published

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	Ovomucoid (protein) Streptogrisin B, Protease B (protein)

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2NU1	Download File View File

Molecular structures of the complexes of SGPB with OMTKY3 aromatic P1 variants Trp18I, His18I, Phe18I and Tyr18I

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Huang, K., Laskowski Jr., M., James, M.N.G.

To be published

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	Ovomucoid (protein) Streptogrisin B (protein)

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2NU2	Download File View File

Accommodation of positively-charged residues in a hydrophobic specificity pocket: Crystal structures of SGPB in complex with OMTKY3 variants Lys18I and Arg18I

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.G.

To be published

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	Ovomucoid (protein) Streptogrisin B, Protease B (protein)

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2NU3	Download File View File

Accommodation of positively-charged residues in a hydrophobic specificity pocket: Crystal structures of SGPB in complex with OMTKY3 variants Lys18I and Arg18I

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Huang, K., Laskowski Jr., M., James, M.N.G.

To be published

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	Ovomucoid (protein) Streptogrisin B, Proteinase B (protein)

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2NU4	Download File View File

Accommodation of positively-charged residues in a hydrophobic specificity pocket: Crystal structures of SGPB in complex with OMTKY3 variants Lys18I and Arg18I

Bateman, K.S., Anderson, S., Lu, W., Qasim, M.A., Laskowski Jr., M., James, M.N.G.

To be published

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Meleagris gallopavo Streptomyces griseus
Macromolecule	Ovomucoid (protein) Streptogrisin B, Proteinase B (protein)

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3LMY	Download File View File

The Crystal Structure of beta-hexosaminidase B in complex with Pyrimethamine

Bateman, K.S., Cherney, M.M., Withers, S.G., Mahuran, D.J., Tropak, M., James, M.N.G.

To be published

Released	2011-02-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Beta-hexosaminidase subunit beta (protein)
Unique Ligands	CP6, NAG, NDG, SO4
Unique branched monosaccharides	BMA, NAG

1 to 16 of 16 Structures

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