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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy ID (Full Lineage) = "1579"

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Search Summary

This query matches 46 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (46)

Scientific Name of Source Organism

	Lactobacillus acidophilus (27)
	Lactobacillus acidophilus NCFM (18)
	Lactobacillus acidophilus ATCC 4796 (1)

Taxonomy

Bacteria (46)

Experimental Method

	X-RAY DIFFRACTION (39)
	SOLUTION NMR (4)
	ELECTRON MICROSCOPY (3)

Polymer Entity Type

Protein (46)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (9)
	2.0 - 2.5 (19)
	2.5 - 3.0 (7)
	3.0 - 3.5 (2)
	3.5 - 4.0 (1)

Release Date

	2005 - 2009 (9)
	2010 - 2014 (13)
	2015 - 2019 (6)
	2020 - 2024 (18)

Enzyme Classification Name

	Hydrolases (8)
	Transferases (4)
	Oxidoreductases (2)
	Isomerases (1)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (4)
	mpstruc (4)
	MemProtMD (3)
	OPM (2)

Symmetry Type

	Asymmetric (25)
	Cyclic (17)
	Dihedral (5)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	Artifacts (3)
	All beta proteins (1)

AllSelected

1 to 25 of 46 Polymer Entities

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2LFI: Entity 1	Download File View File

Solution NMR structure of a MucBP domain (fragment 187-294) of the protein LBA1460 from Lactobacillus acidophilus, Northeast structural genomics consortium target LaR80A

Feldmann, E.A., Ramelot, T.A., Yang, Y., Lee, H., Ciccosanti, C., Janjua, H., Nair, R., Acton, T.B., Xiao, R., Everett, J.K., Prestegard, J.H., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2012-02-01
Method	SOLUTION NMR
Chain ID	A
Organism	Lactobacillus acidophilus
Macromolecule	Protein LBA1460

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2MWM: Entity 1	Download File View File

NMR structure of the protein YP_193882.1 from Lactobacillus acidophilus NCFM in presence of FMN

Dutta, S.K., Serrano, P., Geralt, M., Wuthrich, K., Joint Center for Structural Genomics (JCSG)

To be published

Released	2014-12-10
Method	SOLUTION NMR
Chain ID	A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Putative trp repressor binding protein

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2MWR: Entity 1	Download File View File

Solution Structure of Acidocin B, a Circular Bacteriocin from Lactobacillus acidophilus M46

Vederas, J.C., Acedo, J.Z., van Belkum, M.J., Lohans, C.T.

(2015) Appl Environ Microbiol 81: 2910-2918

Released	2015-03-04
Method	SOLUTION NMR
Chain ID	A
Organism	Lactobacillus acidophilus
Macromolecule	Acidocin B

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2N1M: Entity 1	Download File View File

NMR structure of the apo-form of the flavoprotein YP_193882.1 from Lactobacillus acidophilus NCFM

Dutta, S.K., Serrano, P., Geralt, M., Wuthrich, K., Joint Center for Structural Genomics (JCSG)

To be published

Released	2015-04-22
Method	SOLUTION NMR
Chain ID	A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Putative trp repressor binding protein

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2QGO: Entity 1	Download File View File

Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus acidophilus

Agarwal, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-07-31
Method	X-RAY DIFFRACTION 2.04 Å
Chain ID	A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Putative Fe-S biosynthesis protein

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2XN0: Entity 1	Download File View File

Structure of alpha-galactosidase from Lactobacillus acidophilus NCFM, PtCl4 derivative

Fredslund, F., Abou Hachem, M., Larsen, R.J., Sorensen, P.G., Lo Leggio, L., Svensson, B.

(2011) J Mol Biol 412: 466

Released	2011-08-10
Method	X-RAY DIFFRACTION 2.5 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus NCFM
Macromolecule	ALPHA-GALACTOSIDASE

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2XN1: Entity 1	Download File View File

Structure of alpha-galactosidase from Lactobacillus acidophilus NCFM with TRIS

Fredslund, F., Abou Hachem, M., Larsen, R.J., Sorensen, P.G., Lo Leggio, L., Svensson, B.

(2011) J Mol Biol 412: 466

Released	2011-08-10
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	A, B, C, D
Organism	Lactobacillus acidophilus NCFM
Macromolecule	ALPHA-GALACTOSIDASE

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2XN2: Entity 1	Download File View File

Structure of alpha-galactosidase from Lactobacillus acidophilus NCFM with galactose

Fredslund, F., Abou Hachem, M., Larsen, R.J., Sorensen, P.G., Lo Leggio, L., Svensson, B.

(2011) J Mol Biol 412: 466

Released	2011-08-10
Method	X-RAY DIFFRACTION 1.58 Å
Chain ID	A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	ALPHA-GALACTOSIDASE

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3DCD: Entity 1	Download File View File

X-ray structure of the galactose mutarotase related enzyme Q5FKD7 from Lactobacillus acidophilus at the resolution 1.9A. Northeast Structural Genomics consortium target LaR33.

Kuzin, A.P., Lew, S., Vorobiev, S.M., Seetharaman, J., Wang, H., Mao, L., Foote, E.L., Xiao, R., Nair, R., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2008-07-29
Method	X-RAY DIFFRACTION 1.9 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus
Macromolecule	Galactose mutarotase related enzyme

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3EDO: Entity 1	Download File View File

Crystal structure of Flavoprotein in Complex with FMN (YP_193882.1) from Lactobacillus acidophilus NCFM at 1.20 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released	2008-09-30
Method	X-RAY DIFFRACTION 1.2 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Putative trp repressor binding protein

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3F44: Entity 1	Download File View File

Crystal structure of putative monooxygenase (YP_193413.1) from Lactobacillus acidophilus NCFM at 1.55 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released	2008-11-18
Method	X-RAY DIFFRACTION 1.55 Å
Chain ID	A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	putative monooxygenase

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3F6T: Entity 1	Download File View File

Crystal structure of aspartate aminotransferase (E.C. 2.6.1.1) (YP_194538.1) from Lactobacillus acidophilus NCFM at 2.15 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released	2008-12-09
Method	X-RAY DIFFRACTION 2.15 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Aspartate aminotransferase

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3GBT: Entity 1	Download File View File

Crystal structure of gluconate kinase from Lactobacillus acidophilus

Zhang, Z., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2009-03-10
Method	X-RAY DIFFRACTION 2.4 Å
Chain ID	A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Gluconate kinase

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3HS3: Entity 1	Download File View File

Crystal structure of periplasmic binding ribose operon repressor protein from Lactobacillus acidophilus

Agarwal, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2009-06-23
Method	X-RAY DIFFRACTION 1.6 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus
Macromolecule	Ribose operon repressor

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3IJ6: Entity 1	Download File View File

CRYSTAL STRUCTURE OF AN UNCHARACTERIZED METAL-DEPENDENT HYDROLASE FROM Lactobacillus acidophilus

Patskovsky, Y., Toro, R., Dickey, M., Chang, S., Sauder, J.M., Raushel, F.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2009-08-18
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B, C, D
Organism	Lactobacillus acidophilus
Macromolecule	UNCHARACTERIZED METAL-DEPENDENT HYDROLASE

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3IMH: Entity 1	Download File View File

CRYSTAL STRUCTURE OF GALACTOSE 1-EPIMERASE FROM Lactobacillus acidophilus NCFM

Patskovsky, Y., Toro, R., Dickey, M., Chang, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2009-08-18
Method	X-RAY DIFFRACTION 1.76 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Galactose-1-epimerase

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3LL3: Entity 1	Download File View File

The crystal structure of ligand bound xylulose kinase from Lactobacillus acidophilus

Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2010-03-23
Method	X-RAY DIFFRACTION 2.002 Å
Chain IDs	B, A
Organism	Lactobacillus acidophilus
Macromolecule	Gluconate kinase

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3Q69: Entity 1	Download File View File

X-ray crystal structure of a MucBP domain of the protein LBA1460 from Lactobacillus acidophilus, Northeast structural genomics consortium target LaR80A

Seetharaman, J., Lew, S., Forouhar, F., Wang, D., Ciccosanti, C., Sahdev, S., Nair, R., Rost, B., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2011-04-06
Method	X-RAY DIFFRACTION 2.4 Å
Chain ID	A
Organism	Lactobacillus acidophilus
Macromolecule	probable Zn binding protein

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3ROS: Entity 1	Download File View File

Crystal structure of NAD-dependent aldehyde dehydrogenase from Lactobacillus acidophilus

Eswaramoorthy, S., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)

To be published

Released	2011-05-18
Method	X-RAY DIFFRACTION 1.88 Å
Chain ID	A
Organism	Lactobacillus acidophilus
Macromolecule	NAD-dependent aldehyde dehydrogenase

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3TFX: Entity 1	Download File View File

Crystal structure of Orotidine 5'-phosphate decarboxylase from Lactobacillus acidophilus

Satyanarayana, L., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., LaFleur, J., Seidel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)

To be published

Released	2011-09-28
Method	X-RAY DIFFRACTION 2.19 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus
Macromolecule	Orotidine 5'-phosphate decarboxylase

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4AIE: Entity 1	Download File View File

Structure of glucan-1,6-alpha-glucosidase from Lactobacillus acidophilus NCFM

Fredslund, F., Navarro Poulsen, J.C., Lo Leggio, L.

(2012) J Bacteriol 194: 4249

Released	2012-08-29
Method	X-RAY DIFFRACTION 2.05 Å
Chain ID	A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	GLUCAN 1,6-ALPHA-GLUCOSIDASE

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4IA5: Entity 1	Download File View File

Hydratase from Lactobacillus acidophilus - SeMet derivative (apo LAH)

Khoshnevis, S., Neumann, P., Ficner, R.

(2013) Acta Crystallogr D Biol Crystallogr 69: 648-657

Released	2013-03-27
Method	X-RAY DIFFRACTION 2.22 Å
Chain IDs	B, A
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Myosin-crossreactive antigen

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4IA6: Entity 1	Download File View File

Hydratase from lactobacillus acidophilus in a ligand bound form (LA LAH)

Khoshnevis, S., Neumann, P., Ficner, R.

(2013) Acta Crystallogr D Biol Crystallogr 69: 648-657

Released	2013-03-27
Method	X-RAY DIFFRACTION 1.8 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Myosin-crossreactive antigen

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4OXD: Entity 2	Download File View File

Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition

Hoyland, C.N., Aldridge, C., Cleverley, R.M., Sidiq, K., Duchene, M.C., Daniel, R.A., Vollmer, W., Lewis, R.J.

(2014) Structure 22: 949-960

Released	2014-05-21
Method	X-RAY DIFFRACTION 2.8 Å
Chain ID	F [auth H]
Organism	Lactobacillus acidophilus
Macromolecule	MUB-ALA-ZGL-LYS-DSG

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5J9G: Entity 1	Download File View File

Structure of Lactobacillus acidophilus glyceraldehyde-3-phosphate dehydrogenase at 2.21 angstrom resolution

Patel, D., Pappachan, A., Singh, D.D.

To be published

Released	2017-04-19
Method	X-RAY DIFFRACTION 2.21 Å
Chain IDs	A, B
Organism	Lactobacillus acidophilus NCFM
Macromolecule	Glyceraldehyde-3-p dehydrogenase

1 to 25 of 46 Polymer Entities

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