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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: PubMed ID = 16600635

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Oryza sativa Japonica Group (4)
	Vibrio vulnificus (4)
	Homo sapiens (3)
	Ovis aries (3)
	Saccharomyces cerevisiae S288C (2)
	Trypanosoma cruzi (2)
	Middle East respiratory syndrome-related coronavirus (1)
	Mus musculus (1)
	Xenopus laevis (1)

Taxonomy

	Eukaryota (16)
	Bacteria (4)
	Riboviria (1)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (2)
	2.0 - 2.5 (7)
	2.5 - 3.0 (6)
	3.0 - 3.5 (2)

Release Date

	2005 - 2009 (6)
	2010 - 2014 (5)
	2015 - 2019 (9)

Enzyme Classification Name

	Transferases (9)
	Hydrolases (5)

Symmetry Type

	Asymmetric (17)
	Cyclic (3)

SCOP Classification

	All alpha proteins (4)
	All beta proteins (1)
	Alpha and beta proteins (a+b) (2)
	Alpha and beta proteins (a/b) (3)

AllSelected

1 to 20 of 20 Structures

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1YGJ	Download File View File

Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives

Tang, L., Li, M.-H., Cao, P., Wang, F., Chang, W.-R., Bach, S., Reinhardt, J., Ferandin, Y., Koken, M., Galons, H., Wan, Y., Gray, N., Meijer, L., Jiang, T., Liang, D.-C.

(2005) J Biol Chem 280: 31220-31229

Released	2005-07-05
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Ovis aries
Macromolecule	Pyridoxal kinase (protein)
Unique Ligands	RMC

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1YGK	Download File View File

Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives

Tang, L., Li, M.-H., Cao, P., Wang, F., Chang, W.-R., Bach, S., Reinhardt, J., Ferandin, Y., Koken, M., Galons, H., Wan, Y., Gray, N., Meijer, L., Jiang, T., Liang, D.-C.

(2005) J Biol Chem 280: 31220-31229

Released	2005-07-05
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Ovis aries
Macromolecule	Pyridoxal kinase (protein)
Unique Ligands	RRC

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1YHJ	Download File View File

Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives

Tang, L., Li, M.-H., Cao, P., Wang, F., Chang, W.-R., Bach, S., Reinhardt, J., Ferandin, Y., Koken, M., Galons, H., Wan, Y., Gray, N., Meijer, L., Jiang, T., Liang, D.-C.

(2005) J Biol Chem 280: 31220-31229

Released	2005-07-05
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Ovis aries
Macromolecule	Pyridoxal Kinase (protein)
Unique Ligands	R6C

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1ZLT	Download File View File

Crystal Structure of Chk1 Complexed with a Hymenaldisine Analog

Lee, C.C., Ng, K., Wan, Y., Gray, N., Spraggon, G.

To be published

Released	2006-06-27
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase Chk1 (protein)
Unique Ligands	HYM, SO4

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2VGP	Download File View File

Crystal structure of Aurora B kinase in complex with a aminothiazole inhibitor

Andersen, C.B., Wan, Y., Chang, J.W., Lee, C., Liu, Y., Sessa, F., Villa, F., Nallan, L., Musacchio, A., Gray, N.S.

(2008) ACS Chem Biol 3: 180

Released	2008-02-26
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Xenopus laevis
Macromolecule	INNER CENTROMERE PROTEIN A (protein) SERINE/THREONINE-PROTEIN KINASE 12-A (protein)
Unique Ligands	AD6

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3BJC	Download File View File

Crystal structure of the PDE5A catalytic domain in complex with a novel inhibitor

Chen, G., Wang, H., Howard, R., Cai, J., Wan, Y., Ke, H.

(2008) Biochem Pharmacol 75: 1717-1728

Released	2008-04-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	cGMP-specific 3',5'-cyclic phosphodiesterase (protein)
Unique Ligands	MG, WAN, ZN

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3V93	Download File View File

unliganded structure of TcrPDEC1 catalytic domain

Wang, H., Kunz, S., Chen, G., Seebeck, T., Wan, Y., Robinson, H., Martinelli, S., Ke, H.

(2012) J Biol Chem 287: 11788-11797

Released	2012-02-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Trypanosoma cruzi
Macromolecule	Cyclic nucleotide specific phosphodiesterase (protein)
Unique Ligands	MG, ZN

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3V94	Download File View File

TcrPDEC1 catalytic domain in complex with inhibitor wyq16

Wang, H., Kunz, S., Chen, G., Seebeck, T., Wan, Y., Robinson, H., Martinelli, S., Ke, H.

To be published

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Trypanosoma cruzi
Macromolecule	Cyclic nucleotide specific phosphodiesterase (protein)
Unique Ligands	MG, WYQ, ZN

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4JGV	Download File View File

Crystal Structure of Human Nur77 Ligand-binding Domain in Complex with THPN

Zhang, Q., Li, F., Li, A., Tian, X., Wan, W., Wan, Y., Chen, H., Xing, Y., Wu, Q., Lin, T.

(2014) Nat Chem Biol 10: 133-140

Released	2013-12-18
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Homo sapiens
Macromolecule	Nuclear receptor subfamily 4 group A member 1 (protein)
Unique Ligands	GOL, T94

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4OJV	Download File View File

Crystal structure of unliganded yeast PDE1

Tian, Y., Cui, W., Huang, M., Robinson, H., Wan, Y., Wang, Y., Ke, H.

(2014) Biochemistry 53: 4938-4945

Released	2014-12-03
Method	X-RAY DIFFRACTION 1.31 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	3',5'-cyclic-nucleotide phosphodiesterase 1 (protein)
Unique Ligands	MPD, SO4, ZN

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4OJX	Download File View File

crystal structure of yeast phosphodiesterase-1 in complex with GMP

Tian, Y., Cui, W., Huang, M., Robinson, H., Wan, Y., Wang, Y., Ke, H.

(2014) Biochemistry 53: 4938-4945

Released	2014-12-03
Method	X-RAY DIFFRACTION 1.31 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	3',5'-cyclic-nucleotide phosphodiesterase 1 (protein)
Unique Ligands	5GP, MPD, ZN

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5DO2	Download File View File

Complex structure of MERS-RBD bound with 4C2 antibody

Li, Y., Wan, Y., Liu, P., Zhao, J., Lu, G., Qi, J., Wang, Q., Lu, X., Wu, Y., Liu, W., Yuen, K.Y., Perlman, S., Gao, G.F., Yan, J.

(2015) Cell Res 25: 1237-1249

Released	2015-10-14
Method	X-RAY DIFFRACTION 2.409 Å
Organisms	Middle East respiratory syndrome-related coronavirus Mus musculus
Macromolecule	4C2 heavy chain (protein) 4C2 light chain (protein) S protein (protein)
Unique Ligands	NAG

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6JJ4	Download File View File

Crystal structure of OsHXK6-apo form

He, C., Wei, P., Chen, J., Wang, H., Wan, Y., Zhou, J., Zhu, Y., Huang, W., Yin, L.

To be published

Released	2019-07-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Hexokinase-6 (protein)

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6JJ7	Download File View File

Crystal structure of OsHXK6-Glc complex

He, C., Wei, P., Chen, J., Wang, H., Wan, Y., Zhou, J., Zhu, Y., Huang, W., Yin, L.

To be published

Released	2019-07-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Rice hexokinase 6 (protein)
Unique Ligands	BGC

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6JJ8	Download File View File

Crystal structure of OsHXK6-ATP-Mg2+ complex

He, C., Wei, P., Chen, J., Wang, H., Wan, Y., Zhou, J., Zhu, Y., Huang, W., Yin, L.

To be published

Released	2019-07-03
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Rice hexokinase 6 (protein)
Unique Ligands	ADP, MG, PO4

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6JJ9	Download File View File

Crystal structure of OsHXK6-Glc-ATP-Mg2+ complex

He, C., Wei, P., Chen, J., Wang, H., Wan, Y., Zhou, J., Zhu, Y., Huang, W., Yin, L.

To be published

Released	2019-07-03
Method	X-RAY DIFFRACTION 3 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Hexokinase-6 (protein)
Unique Ligands	ADP, BGC, MG, PO4

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6JKZ	Download File View File

Crystal structure of VvPlpA from Vibrio vulnificus

Ma, Q., Wan, Y., Liu, C.

(2019) J Biol Chem 294: 11391-11401

Released	2019-05-15
Method	X-RAY DIFFRACTION 1.397 Å
Organisms	Vibrio vulnificus
Macromolecule	Thermolabile hemolysin (protein)
Unique Ligands	1PS, CL

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6JL0	Download File View File

Crystal structure of VvPlpA from Vibrio vulnificus

Ma, Q., Wan, Y., Liu, C.

(2019) J Biol Chem 294: 11391-11401

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.073 Å
Organisms	Vibrio vulnificus
Macromolecule	Thermolabile hemolysin (protein)
Unique Ligands	BR

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6JL1	Download File View File

Crystal structure of VvPlpA G389D from Vibrio vulnificus

Ma, Q., Wan, Y., Liu, C.

(2019) J Biol Chem 294: 11391-11401

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Vibrio vulnificus
Macromolecule	Thermolabile hemolysin (protein)

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6JL2	Download File View File

Crystal structure of VvPlpA G389N from Vibrio vulnificus

Ma, Q., Wan, Y., Liu, C.

(2019) J Biol Chem 294: 11391-11401

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Vibrio vulnificus
Macromolecule	Thermolabile hemolysin (protein)
Unique Ligands	1PS, P6G

1 to 20 of 20 Structures

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