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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: PubMed ID = 9083478

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Search Summary

This query matches 2 Structures.

Refinements

Structure Determination Methodology

experimental (2)

Scientific Name of Source Organism

Homo sapiens (2)

Taxonomy

Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (2)

Polymer Entity Type

	DNA (2)
	Protein (2)

Refinement Resolution (Å)

1.5 - 2.0 (2)

Release Date

2010 - 2014 (2)

Enzyme Classification Name

Oxidoreductases (2)

Symmetry Type

Asymmetric (2)

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Explore in 3D

3S57	Download File View File

ABH2 cross-linked with undamaged dsDNA-1 containing cofactors

Yi, C., Chen, B., Qi, B., Ramirez, B., Zhang, W., Jia, G., Zhang, L., Li, C.Q., Dinner, A.R., Yang, C.-G., He, C.

(2012) Nat Struct Mol Biol 19: 671-676

Released	2012-06-06
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 (protein) 5'-D(CPTPGPTPCPAPTPCPAPCPTPGPCPG)-3' (nucleic acid) 5'-D(TPCPGPCPAPGPTPGPAPTPGPAPCPA)-3' (nucleic acid)
Unique Ligands	AKG, GOL, MN, XL3

Explore in 3D

3S5A	Download File View File

ABH2 cross-linked to undamaged dsDNA-2 with cofactors

Yi, C., Chen, B., Qi, B., Ramirez, B., Zhang, W., Jia, G., Zhang, L., Li, C.Q., Dinner, A.R., Yang, C.-G., He, C.

(2012) Nat Struct Mol Biol 19: 671-676

Released	2012-06-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 (protein) 5'-D(CPTPGPTPCPTPCPAPCPTPGPTPCPG)-3' (nucleic acid) 5'-D(TPCPGPAPCPAPGPTPGPAPGPAPCPA)-3' (nucleic acid)
Unique Ligands	AKG, GOL, MN, XL3

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

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Refinement Resolution (Å)

Release Date

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Symmetry Type

3S57

ABH2 cross-linked with undamaged dsDNA-1 containing cofactors

3S5A

ABH2 cross-linked to undamaged dsDNA-2 with cofactors