2HC5

Solution NMR Structure of Protein yvyC from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR482.

• PDB DOI: https://doi.org/10.2210/pdb2HC5/pdb
• BMRB: 7170

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Bacillus subtilis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2006-06-15 Released: 2006-08-15 
• Deposition Author(s): Eletsky, A., Liu, G., Atreya, H.S., Sukumaran, D.K., Wang, D., Cunningham, K., Janjua, H., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Literature

NMR structure of protein YvyC from Bacillus subtilis reveals unexpected structural similarity between two PFAM families.

Eletsky, A., Sukumaran, D.K., Xiao, R., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T.

(2009) Proteins 76: 1037-1041

• PubMed: 19455708 
• DOI: https://doi.org/10.1002/prot.22459
• Primary Citation of Related Structures:  
  2HC5

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Organizational Affiliation: 

Department of Chemistry, State University of New York at Buffalo, Buffalo, New York 14260, USA.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 14.09 kDa 
• Atom Count: 993 
• Modelled Residue Count: 117 
• Deposited Residue Count: 117 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical protein yvyC	A	117	Bacillus subtilis	Mutation(s): 0  Gene Names: yvyC
UniProt
Find proteins for P39737 (Bacillus subtilis (strain 168)) Explore P39737  Go to UniProtKB:  P39737

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-08-15 
Deposition Author(s): Eletsky, A., Liu, G., Atreya, H.S., Sukumaran, D.K., Wang, D., Cunningham, K., Janjua, H., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

Revision History  

• Version 1.0: 2006-08-15
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2020-02-26
  Changes: Database references, Derived calculations, Other
• Version 1.4: 2023-06-14
  Changes: Database references, Other
• Version 1.5: 2024-05-08
  Changes: Data collection, Database references