2PH0

Crystal structure of the Q6D2T7_ERWCT protein from Erwinia carotovora. NESG target EwR41.

PDB DOI: https://doi.org/10.2210/pdb2PH0/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Pectobacterium carotovorum
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2007-04-10 Released: 2007-04-24
Deposition Author(s): Vorobiev, S.M., Neely, H., Seetharaman, J., Chen, C.-X., Cunningham, K., Ma, L.-C., Owens, L., Fang, Y., Xiao, R., Acton, T., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å
R-Value Free:
0.243 (Depositor), 0.256 (DCC)
R-Value Work:
0.219 (Depositor), 0.231 (DCC)
R-Value Observed:
0.219 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.4 of the entry. See complete history.

Literature

Crystal structure of the Q6D2T7_ERWCT protein from Erwinia carotovora.

Vorobiev, S.M., Neely, H., Seetharaman, J., Chen, C.-X., Cunningham, K., Ma, L.-C., Owens, L., Xiao, R., Acton, T., Montelione, G.T., Hunt, J.F., Tong, L.

To be published.

Macromolecule Content

Total Structure Weight: 39.15 kDa
Atom Count: 2,669
Modelled Residue Count: 323
Deposited Residue Count: 348
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B	174	Pectobacterium carotovorum	Mutation(s): 5 Gene Names: ECA3008
UniProt
Find proteins for Q6D2T7 (Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)) Explore Q6D2T7 Go to UniProtKB: Q6D2T7
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q6D2T7
Sequence Annotations Expand
Reference Sequence LOADING

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A, B	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å
R-Value Free: 0.243 (Depositor), 0.256 (DCC)
R-Value Work: 0.219 (Depositor), 0.231 (DCC)
R-Value Observed: 0.219 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 132.584	α = 90
b = 38.736	β = 90
c = 58.26	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
HKL-2000	data collection
HKL-2000	data reduction
HKL-2000	data scaling
SHELXD	phasing
SHELXE	model building
RESOLVE	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2007-04-24

Deposition Author(s):

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2007-04-24
Type: Initial release
Version 1.1: 2007-10-01
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2018-01-24
Changes: Database references, Structure summary
Version 1.4: 2024-11-13
Changes: Data collection, Database references, Derived calculations, Structure summary