5JHE

The Crystal Structure of the Saccharomyces cerevisiae Co-Chaperone Cpr7

• PDB DOI: https://doi.org/10.2210/pdb5JHE/pdb

• Classification: CHAPERONE
• Organism(s): Saccharomyces cerevisiae S288C
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2016-04-20 Released: 2017-04-26 
• Deposition Author(s): Yu, Q., Xu, L.
• Funding Organization(s): Chinese National Natural Science Foundation, Ministry of Science and Technology (China), Scientific Research Grant of Hefei Science Center of CAS

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free: 
  0.211 (Depositor), 0.210 (DCC) 
• R-Value Work: 
  0.185 (Depositor), 0.190 (DCC) 
• R-Value Observed: 
  0.186 (Depositor) 

Starting Model: experimental

Literature

The Crystal Structure of the Saccharomyces cerevisiae Co-Chaperone Cpr7

Yu, Q., Xu, L.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 45.74 kDa 
• Atom Count: 3,431 
• Modelled Residue Count: 388 
• Deposited Residue Count: 397 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Peptidyl-prolyl cis-trans isomerase CYP7	A	397	Saccharomyces cerevisiae S288C	Mutation(s): 0  Gene Names: CPR7, YJR032W, J1585 EC: 5.2.1.8
UniProt
Find proteins for P47103 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P47103  Go to UniProtKB:  P47103

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free:  0.211 (Depositor), 0.210 (DCC) 
• R-Value Work:  0.185 (Depositor), 0.190 (DCC) 
• R-Value Observed: 0.186 (Depositor) 

Space Group: P 4₂

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 75.332	α = 90
b = 75.332	β = 90
c = 100.794	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling
MOLREP	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2017-04-26 
Deposition Author(s): Yu, Q., Xu, L.

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Funding Organization	Location	Grant Number
Chinese National Natural Science Foundation	China	31130018
Ministry of Science and Technology (China)	China	2012CB917200
Chinese National Natural Science Foundation	China	31370732
Scientific Research Grant of Hefei Science Center of CAS	China	2015SRG-HSC042

Revision History  

• Version 1.0: 2017-04-26
  Type: Initial release
  
• Version 1.1: 2017-10-18
  Changes: Author supporting evidence
• Version 1.2: 2023-11-08
  Changes: Data collection, Database references, Refinement description