6LWT

Crystal structure of Staphylococcal Superantigen-Like protein 10

• PDB DOI: https://doi.org/10.2210/pdb6LWT/pdb

• Classification: IMMUNE SYSTEM
• Organism(s): Staphylococcus aureus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-02-08 Released: 2021-02-10 
• Deposition Author(s): Nan, J., Chengliang, W., Tianrong, H.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free: 
  0.246 (Depositor), 0.250 (DCC) 
• R-Value Work: 
  0.209 (Depositor), 0.220 (DCC) 
• R-Value Observed: 
  0.211 (Depositor) 

Literature

Crystal structure of Staphylococcal Superantigen-Like protein 10

Nan, J., Chengliang, W., Tianrong, H.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content

• Total Structure Weight: 48.93 kDa 
• Atom Count: 3,184 
• Modelled Residue Count: 377 
• Deposited Residue Count: 416 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Superantigen-like protein SSL10	A, B	208	Staphylococcus aureus	Mutation(s): 0  Gene Names: E5491_02145, FAF10_06335, FAF13_10025, FAF15_01065, FAF17_11070
UniProt
Find proteins for Q2G2X7 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2G2X7  Go to UniProtKB:  Q2G2X7

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free:  0.246 (Depositor), 0.250 (DCC) 
• R-Value Work:  0.209 (Depositor), 0.220 (DCC) 
• R-Value Observed: 0.211 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 41.243	α = 90
b = 71.211	β = 90
c = 140.657	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-2000	data scaling
PDB_EXTRACT	data extraction
HKL-2000	data reduction
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2021-02-10 
Deposition Author(s): Nan, J., Chengliang, W., Tianrong, H.

Revision History  

• Version 1.0: 2021-02-10
  Type: Initial release
  
• Version 1.1: 2024-03-27
  Changes: Data collection, Database references