7X3K

Cryo-EM structure of RAC in the State C2 RNC-RAC complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


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Literature

Structural remodeling of ribosome associated Hsp40-Hsp70 chaperones during co-translational folding.

Chen, Y.Tsai, B.Li, N.Gao, N.

(2022) Nat Commun 13: 3410-3410

  • DOI: https://doi.org/10.1038/s41467-022-31127-4
  • Primary Citation of Related Structures:  
    7X34, 7X3K

  • PubMed Abstract: 

    Ribosome associated complex (RAC), an obligate heterodimer of HSP40 and HSP70 (Zuo1 and Ssz1 in yeast), is conserved in eukaryotes and functions as co-chaperone for another HSP70 (Ssb1/2 in yeast) to facilitate co-translational folding of nascent polypeptides. Many mechanistic details, such as the coordination of one HSP40 with two HSP70s and the dynamic interplay between RAC-Ssb and growing nascent chains, remain unclear. Here, we report three sets of structures of RAC-containing ribosomal complexes isolated from Saccharomyces cerevisiae. Structural analyses indicate that RAC on the nascent-chain-free ribosome is in an autoinhibited conformation, and in the presence of a nascent chain at the peptide tunnel exit (PTE), RAC undergoes large-scale structural remodeling to make Zuo1 J-Domain more accessible to Ssb. Our data also suggest a role of Zuo1 in orienting Ssb-SBD proximal to the PTE for easy capture of the substrate. Altogether, in accordance with previous data, our work suggests a sequence of structural remodeling events for RAC-Ssb during co-translational folding, triggered by the binding and passage of growing nascent chain from one to another.


  • Organizational Affiliation

    State Key Laboratory of Membrane Biology, School of Life Science, Tsinghua University, Beijing, 100084, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Zuotin433Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: ZUO1YGR285C
UniProt
Find proteins for P32527 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P32527 
Go to UniProtKB:  P32527
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP32527
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosome-associated complex subunit SSZ1538Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: SSZ1PDR13YHR064C
UniProt
Find proteins for P38788 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P38788 
Go to UniProtKB:  P38788
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP38788
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, China)China--

Revision History  (Full details and data files)

  • Version 1.0: 2022-06-29
    Type: Initial release