8OLX

MutSbeta bound to (CAG)2 DNA (canonical form)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 2.1 of the entry. See complete history


Literature

Elucidation of multiple high-resolution states of human MutS beta by cryo-EM reveals interplay between ATP/ADP binding and heteroduplex DNA recognition

Lee, J.H.Thomsen, M.Daub, H.Thieulin-Pardo, G.Steinbacher, S.C.Sztyler, A.Dahiya, V.Neudegger, T.Dominguez, C.Iyer, R.R.Wilkinson, H.A.Monteagudo, E.Plotnikov, N.V.Felsenfeld, D.P.Haque, T.S.Finley, M.Boudet, J.Vogt, T.F.Prasad, B.C.

(2024) bioRxiv 


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
DNA mismatch repair protein Msh2934Homo sapiensMutation(s): 0 
Gene Names: MSH2
UniProt & NIH Common Fund Data Resources
Find proteins for P43246 (Homo sapiens)
Explore P43246 
Go to UniProtKB:  P43246
PHAROS:  P43246
GTEx:  ENSG00000095002 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP43246
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
DNA mismatch repair protein Msh31,137Homo sapiensMutation(s): 1 
Gene Names: MSH3DUC1DUG
UniProt & NIH Common Fund Data Resources
Find proteins for P20585 (Homo sapiens)
Explore P20585 
Go to UniProtKB:  P20585
PHAROS:  P20585
GTEx:  ENSG00000113318 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP20585
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  • Reference Sequence

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Entity ID: 3
MoleculeChains LengthOrganismImage
DNA (21-MER)21synthetic construct
Sequence Annotations
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  • Reference Sequence
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Entity ID: 4
MoleculeChains LengthOrganismImage
DNA (27-MER)27synthetic construct
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTcryoSPARC

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
CHDI FoundationUnited States--

Revision History  (Full details and data files)

  • Version 1.0: 2023-05-24
    Type: Initial release
  • Version 1.1: 2024-07-24
    Changes: Data collection
  • Version 2.0: 2024-11-13
    Changes: Advisory, Atomic model, Data collection, Derived calculations, Non-polymer description, Polymer sequence, Source and taxonomy, Structure summary
  • Version 2.1: 2024-12-04
    Changes: Data collection, Database references