Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
C [auth L]d6b3sl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth D]d6b3sd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
I [auth G]d6b3sg1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
L [auth K]d6b3sk1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad6b3sa1 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like L domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad6b3sa2 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth B]d6b3sb1 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like L domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth B]d6b3sb2 Small proteins Knottins (small inhibitors, toxins, lectins) Growth factor receptor domain automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth B]d6b3sb3 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
G [auth E]d6b3se1 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like L domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
G [auth E]d6b3se2 Small proteins Knottins (small inhibitors, toxins, lectins) Growth factor receptor domain automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
G [auth E]d6b3se3 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
J [auth I]d6b3si1 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like L domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
J [auth I]d6b3si2 Small proteins Knottins (small inhibitors, toxins, lectins) Growth factor receptor domain automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
J [auth I]d6b3si3 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyL domain-like8038760 3001010 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGrowth factor receptor domain-like8038763 3000398 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyL domain-like8038760 3001010 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyGrowth factor receptor domain-like8038763 3000398 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyGrowth factor receptor domain-like8038763 3000398 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyL domain-like8038760 3001010 SCOP2B (2022-06-29)
J [auth I]SCOP2B SuperfamilyGrowth factor receptor domain-like8038763 3000398 SCOP2B (2022-06-29)
J [auth I]SCOP2B SuperfamilyL domain-like8038760 3001010 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth C]PF07654e6b3sC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
E [auth C]PF07686e6b3sC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
H [auth F]PF07654e6b3sF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
H [auth F]PF07686e6b3sF2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
K [auth J]PF07654e6b3sJ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
K [auth J]PF07686e6b3sJ2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
B [auth H]PF07654e6b3sH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
B [auth H]PF07686e6b3sH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
C [auth L]PF07654e6b3sL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
C [auth L]PF07686e6b3sL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
F [auth D]PF07654e6b3sD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
F [auth D]PF07686e6b3sD2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
I [auth G]PF07654e6b3sG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
I [auth G]PF07686e6b3sG2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
L [auth K]PF07654e6b3sK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
L [auth K]PF07686e6b3sK2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
APF01030e6b3sA1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF01030ECOD (1.6)
D [auth B]PF01030e6b3sB1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF01030ECOD (1.6)
G [auth E]PF01030e6b3sE1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF01030ECOD (1.6)
J [auth I]PF01030e6b3sI1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF01030ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth H],
E [auth C],
H [auth F],
K [auth J]
Necitumumab Fab VH-CH1 Homo sapiens (human) IGHV4-30-4*01, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202416-0)
C [auth L],
F [auth D],
I [auth G],
L [auth K]
Necitumumab Fab L-KAPPA Homo sapiens (human) IGKV3D-11*02, IGKJ4*01, IGKJ4*02, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202416-0)
A,
D [auth B],
G [auth E],
J [auth I]
Epidermal Growth Factor Receptor (EGFR) EGFR1 Homo sapiens (human) EGFR*01 R-LIKE-DOMAIN EGFR (Pr28-459) RPI EGFR1 IMGT (202416-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth H],
E [auth C],
H [auth F],
K [auth J]
Heavy ChainIGHV4 -epidermal growth factor receptorSAbDab (2024-04-26)
C [auth L],
F [auth D],
I [auth G],
L [auth K]
Light ChainIGKV3 Kappaepidermal growth factor receptorSAbDab (2024-04-26)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
B [auth H],
E [auth C],
H [auth F],
K [auth J]
Necitumumab EGFR/ERBB1/HER1Therapeutic SAbDab (2024-04-26)
C [auth L],
F [auth D],
I [auth G],
L [auth K]
Necitumumab EGFR/ERBB1/HER1Therapeutic SAbDab (2024-04-26)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth B],
G [auth E],
J [auth I]
PF00757Furin-like cysteine rich region (Furin-like)Furin-like cysteine rich region- Domain
A,
D [auth B],
G [auth E],
J [auth I]
PF01030Receptor L domain (Recep_L_domain)Receptor L domain- Repeat
A,
D [auth B],
G [auth E],
J [auth I]
PF14843Growth factor receptor domain IV (GF_recep_IV)Growth factor receptor domain IVThis is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth H],
E [auth C],
H [auth F],
K [auth J]
Necitumumab Fab Heavy chain---
C [auth L],
F [auth D],
I [auth G],
L [auth K]
Necitumumab Fab Light chain---
A,
D [auth B],
G [auth E],
J [auth I]
Epidermal growth factor receptor

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
D [auth B],
G [auth E],
J [auth I]
PharosP00533