6BNV

CryoEM structure of MyosinVI-actin complex in the rigor (nucleotide-free) state, backbone-averaged with side chains truncated to alanine


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth B]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
H [auth B]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
I [auth C]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
I [auth C]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
J [auth D]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
J [auth D]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
L [auth F]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
L [auth F]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
M [auth G]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
M [auth G]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
N [auth H]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
N [auth H]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
G [auth A]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
G [auth A]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
K [auth E]SCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
K [auth E]SCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyEF-hand8037345 3001983 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyEF-hand8037345 3001983 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyEF-hand8037345 3001983 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyEF-hand8037345 3001983 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyEF-hand8037345 3001983 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyEF-hand8037345 3001983 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth I]Myosin_N_2e6bnvI1 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_N_2ECOD (1.6)
A [auth I]KOG0163_1e6bnvI3 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0163_1ECOD (1.6)
A [auth I]Myosin_head_1e6bnvI2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_head_1ECOD (1.6)
B [auth J]Myosin_N_2e6bnvJ3 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_N_2ECOD (1.6)
B [auth J]KOG0163_1e6bnvJ1 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0163_1ECOD (1.6)
B [auth J]Myosin_head_1e6bnvJ2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_head_1ECOD (1.6)
C [auth K]Myosin_N_2e6bnvK1 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_N_2ECOD (1.6)
C [auth K]KOG0163_1e6bnvK3 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0163_1ECOD (1.6)
C [auth K]Myosin_head_1e6bnvK2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_head_1ECOD (1.6)
D [auth L]Myosin_N_2e6bnvL1 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_N_2ECOD (1.6)
D [auth L]KOG0163_1e6bnvL2 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0163_1ECOD (1.6)
D [auth L]Myosin_head_1e6bnvL3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_head_1ECOD (1.6)
E [auth M]Myosin_N_2e6bnvM1 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_N_2ECOD (1.6)
E [auth M]KOG0163_1e6bnvM2 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0163_1ECOD (1.6)
E [auth M]Myosin_head_1e6bnvM3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_head_1ECOD (1.6)
F [auth N]Myosin_N_2e6bnvN2 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_N_2ECOD (1.6)
F [auth N]KOG0163_1e6bnvN1 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0163_1ECOD (1.6)
F [auth N]Myosin_head_1e6bnvN3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_head_1ECOD (1.6)
H [auth B]Actin_1ste6bnvB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
H [auth B]Actin_2nde6bnvB2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
I [auth C]Actin_1ste6bnvC1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
I [auth C]Actin_2nde6bnvC2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
J [auth D]Actin_1ste6bnvD2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
J [auth D]Actin_2nde6bnvD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
L [auth F]Actin_1ste6bnvF2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
L [auth F]Actin_2nde6bnvF1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
M [auth G]Actin_1ste6bnvG2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
M [auth G]Actin_2nde6bnvG1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
N [auth H]Actin_1ste6bnvH2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
N [auth H]Actin_2nde6bnvH1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
G [auth A]Actin_1ste6bnvA2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
G [auth A]Actin_2nde6bnvA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
K [auth E]Actin_1ste6bnvE2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
K [auth E]Actin_2nde6bnvE1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
OEF-hand_7_8e6bnvO2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
OEF-hand_7_5e6bnvO1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
PEF-hand_7_8e6bnvP2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
PEF-hand_7_5e6bnvP1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
QEF-hand_7_8e6bnvQ2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
QEF-hand_7_5e6bnvQ1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
REF-hand_7_8e6bnvR1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
REF-hand_7_5e6bnvR2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
TEF-hand_7_8e6bnvT1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
TEF-hand_7_5e6bnvT2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
SEF-hand_7_8e6bnvS2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
SEF-hand_7_5e6bnvS1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Unconventional myosin-VI
Actin, alpha skeletal muscle
O, P, Q, R, S
Calmodulin -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036961Kinesin motor domain superfamilyHomologous Superfamily
IPR049016Myosin VI, lever armDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR036114Class VI myosin, motor domainDomain
IPR001609Myosin head, motor domainDomain
IPR032412Myosin VI, cargo binding domainDomain
IPR004009Myosin, N-terminal, SH3-likeDomain
IPR008989Myosin S1 fragment, N-terminalHomologous Superfamily
IPR020902Actin/actin-like conserved siteConserved Site
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
IPR004001Actin, conserved siteConserved Site
IPR004000Actin familyFamily
O, P, Q, R, S
IPR018247EF-Hand 1, calcium-binding siteBinding Site
O, P, Q, R, S
IPR002048EF-hand domainDomain
O, P, Q, R, S
IPR011992EF-hand domain pairHomologous Superfamily