1B0D

Structural effects of monovalent anions on polymorphic lysozyme crystals


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.5291THE CRYSTAL WAS OBTAINED IN PRESENCE OF NAPTS WITH A FINAL PROTEIN CONCENTRATION OF 40.5 MG/ML IN HANGING DROPS USING VAPOR DIFFUSION METHOD. THE EQUILIBRATION AT 291K WAS DONE AGAINST A RESERVOIR SOLUTION CONTAINING 90 MM NAPTS, 50 MM SODIUM ACETATE ADJUSTED AT PH 4.5., vapor diffusion - hanging drop
Crystal Properties
Matthews coefficientSolvent content
2.0740.58

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 79.06α = 90
b = 79.06β = 90
c = 37.97γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293IMAGE PLATERIGAKU RAXIS II1994-04-01MMONOCHROMATIC
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU200

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8513.597.50.04910.56.61046221.4
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.851.985.80.1354.54.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUT1.841410461108296.10.2020.241RANDOM18.7
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
x_dihedral_angle_d23.22
x_scangle_it4.72
x_scbond_it2.94
x_mcangle_it2.39
x_mcbond_it1.52
x_angle_deg1.33
x_improper_angle_d1.15
x_bond_d0.006
x_bond_d_na
x_bond_d_prot
RMS Deviations
KeyRefinement Restraint Deviation
x_dihedral_angle_d23.22
x_scangle_it4.72
x_scbond_it2.94
x_mcangle_it2.39
x_mcbond_it1.52
x_angle_deg1.33
x_improper_angle_d1.15
x_bond_d0.006
x_bond_d_na
x_bond_d_prot
x_angle_d
x_angle_d_na
x_angle_d_prot
x_angle_deg_na
x_angle_deg_prot
x_dihedral_angle_d_na
x_dihedral_angle_d_prot
x_improper_angle_d_na
x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1001
Nucleic Acid Atoms
Solvent Atoms86
Heterogen Atoms11

Software

Software
Software NamePurpose
MOSFLMdata reduction
CCP4data reduction
CCP4model building
X-PLORrefinement
CCP4data scaling
CCP4phasing