X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.3pH 5.3
Crystal Properties
Matthews coefficientSolvent content
2.244

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 43.23α = 90
b = 85.64β = 90
c = 65.5γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray287IMAGE PLATEMARRESEARCH1994-10-15M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X11EMBL/DESY, HAMBURGX11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.910960.07219566

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTWILD TYPE TRANSTHYRETIN1.910195660.15825
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.81
p_transverse_tor17.258
p_scangle_it11.696
p_scbond_it8.125
p_mcangle_it4.6
p_planar_tor3.395
p_mcbond_it3.043
p_xyhbond_nbd0.6
p_multtor_nbd0.262
p_singtor_nbd0.185
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.81
p_transverse_tor17.258
p_scangle_it11.696
p_scbond_it8.125
p_mcangle_it4.6
p_planar_tor3.395
p_mcbond_it3.043
p_xyhbond_nbd0.6
p_multtor_nbd0.262
p_singtor_nbd0.185
p_chiral_restr0.179
p_planar_d0.033
p_angle_d0.027
p_bond_d0.019
p_angle_deg
p_hb_or_metal_coord
p_plane_restr
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1798
Nucleic Acid Atoms
Solvent Atoms168
Heterogen Atoms

Software

Software
Software NamePurpose
CCP4model building
CCP4refinement
DENZOdata reduction
SCALEPACKdata scaling
CCP4phasing