2AUB

Lysozyme structure derived from thin-film-based crystals


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.0539.93

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 79.21α = 90
b = 79.21β = 90
c = 37.42γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray2004-05-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID130.9755ESRFID13

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.727.213598

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENT1.7272.2135981286667990.220.2080.2080.283RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.475
r_dihedral_angle_4_deg26.76
r_dihedral_angle_3_deg12.761
r_dihedral_angle_1_deg7.027
r_angle_refined_deg2.047
r_angle_other_deg1.011
r_symmetry_vdw_refined0.336
r_symmetry_hbond_refined0.316
r_symmetry_vdw_other0.239
r_xyhbond_nbd_refined0.233
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.475
r_dihedral_angle_4_deg26.76
r_dihedral_angle_3_deg12.761
r_dihedral_angle_1_deg7.027
r_angle_refined_deg2.047
r_angle_other_deg1.011
r_symmetry_vdw_refined0.336
r_symmetry_hbond_refined0.316
r_symmetry_vdw_other0.239
r_xyhbond_nbd_refined0.233
r_nbd_refined0.224
r_nbtor_refined0.205
r_chiral_restr0.16
r_nbd_other0.122
r_nbtor_other0.079
r_bond_refined_d0.02
r_gen_planes_refined0.015
r_bond_other_d0.002
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_it
r_mcbond_other
r_mcangle_it
r_scbond_it
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1001
Nucleic Acid Atoms
Solvent Atoms56
Heterogen Atoms

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
CNSrefinement
Quantamodel building
XTALVIEWrefinement
REFMACrefinement
CCP4data scaling
CNSphasing