2L53

Solution NMR Structure of apo-calmodulin in complex with the IQ motif of Human Cardiac Sodium Channel NaV1.5


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1 mM entity_1-3, 1 mM entity_2-495% H2O/5% D2O1006.3ambient298
22D 1H-1H COSY1 mM entity_1-3, 1 mM entity_2-495% H2O/5% D2O1006.3ambient298
32D 1H-15N HSQC1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
43D CBCA(CO)NH1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
53D HNCACB1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
63D 1H-15N NOESY1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
73D 1H-13C NOESY1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
83D HNCO1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
93D H(CCO)NH1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
103D HCCH-TOCSY1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
112D 1H-1H TOCSY1 mM entity_1-3, 1 mM entity_2-495% H2O/5% D2O1006.3ambient298
123D HCCH-COSY1 mM [U-99% 13C; U-99% 15N] calmodulin, 1 mM [U-99% 13C; U-99% 15N] entity_2-295% H2O/5% D2O1006.3ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsrestrained molecular dynamicAMBER
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAMBER10Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
2structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
3data analysisTALOSCornilescu, Delaglio and Bax
4data analysisSPARKYGoddard
5chemical shift assignmentSPARKYGoddard
6collectionTOPSPINBruker Biospin