2NAM
Full-length WT SOD1 in DPC MICELLE
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D HNCACB | 20 mM DPC-1, 0.4 mM [U-13C; U-15N] entity-2 | 90% H2O/10% D2O | 0 | 4 | ambient | 313 | |
2 | 3D 1H-15N NOESY | 20 mM DPC-1, 0.4 mM [U-13C; U-15N] entity-2 | 90% H2O/10% D2O | 0 | 4 | ambient | 313 | |
3 | 3D 1H-15N TOCSY | 20 mM DPC-1, 0.4 mM [U-13C; U-15N] entity-2 | 90% H2O/10% D2O | 0 | 4 | ambient | 313 | |
4 | 3D CBCA(CO)NH | 20 mM DPC-1, 0.4 mM [U-13C; U-15N] entity-2 | 90% H2O/10% D2O | 0 | 4 | ambient | 313 | |
5 | 2D 1H-15N HSQC | 20 mM DPC-1, 0.4 mM [U-13C; U-15N] entity-2 | 90% H2O/10% D2O | 0 | 4 | ambient | 313 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | Forcefield energy minimization using amber99sb-idln | GROMACS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 5 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | GROMACS | 4.5.3 | David van der Spoel, and Erik Lindahl |
2 | structure solution | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |