2UW3

Structure of PKA-PKB chimera complexed with 5-methyl-4-phenyl-1H- pyrazole


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.4148.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 72.789α = 90
b = 74.49β = 90
c = 79.711γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODE

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.1943.698.70.0611.62.621335
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.192.3195.80.362.12.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.1943.5921335113398.40.1910.1870.252RANDOM28.73
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.311.44-1.12
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.068
r_dihedral_angle_4_deg16.896
r_dihedral_angle_3_deg16.341
r_dihedral_angle_1_deg5.825
r_angle_refined_deg1.358
r_angle_other_deg0.898
r_symmetry_vdw_other0.289
r_symmetry_vdw_refined0.235
r_nbd_refined0.199
r_nbd_other0.189
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.068
r_dihedral_angle_4_deg16.896
r_dihedral_angle_3_deg16.341
r_dihedral_angle_1_deg5.825
r_angle_refined_deg1.358
r_angle_other_deg0.898
r_symmetry_vdw_other0.289
r_symmetry_vdw_refined0.235
r_nbd_refined0.199
r_nbd_other0.189
r_nbtor_refined0.185
r_symmetry_hbond_refined0.12
r_xyhbond_nbd_refined0.108
r_scangle_it0.095
r_nbtor_other0.087
r_chiral_restr0.086
r_mcangle_it0.08
r_scbond_it0.078
r_mcbond_it0.06
r_bond_refined_d0.013
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2945
Nucleic Acid Atoms
Solvent Atoms243
Heterogen Atoms12

Software

Software
Software NamePurpose
REFMACrefinement