3BXL

Crystal structure of the R-type calcium channeL (CaV2.3) IQ domain and CA2+calmodulin complex


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
3.7166.86

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 124.606α = 90
b = 124.606β = 90
c = 74.024γ = 90
Symmetry
Space GroupI 41 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayIMAGE PLATERIGAKU RAXIS IV2006-10-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU2001.54178

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.33012496

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.3301249664299.270.207680.204930.26162RANDOM41.193
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.030.03-0.05
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.406
r_dihedral_angle_4_deg21.035
r_dihedral_angle_3_deg17.444
r_dihedral_angle_1_deg4.777
r_scangle_it1.874
r_scbond_it1.142
r_angle_refined_deg1.098
r_mcangle_it1.021
r_mcbond_it0.622
r_nbtor_refined0.296
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.406
r_dihedral_angle_4_deg21.035
r_dihedral_angle_3_deg17.444
r_dihedral_angle_1_deg4.777
r_scangle_it1.874
r_scbond_it1.142
r_angle_refined_deg1.098
r_mcangle_it1.021
r_mcbond_it0.622
r_nbtor_refined0.296
r_nbd_refined0.205
r_symmetry_vdw_refined0.192
r_xyhbond_nbd_refined0.117
r_symmetry_hbond_refined0.11
r_chiral_restr0.087
r_metal_ion_refined0.084
r_bond_refined_d0.008
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1291
Nucleic Acid Atoms
Solvent Atoms138
Heterogen Atoms14

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing