3EFT

Crystal structure of the complex between Carbonic Anhydrase II and a spin-labeled sulfonamide incorporating TEMPO moiety


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP27750mM Tris.HCl pH 7.7-7.8, 2mM sodium 4-(hydroxymercury)benzoate, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.0941.19

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.13α = 90
b = 41.5β = 104.3
c = 72.31γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDOXFORD SAPPHIRE CCD2008-06-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SEALED TUBEOXFORD DIFFRACTION ENHANCE ULTRA1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.842089.40.0913.12.920861209882

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1CA21.8511.8119758104099.50.194690.192310.2403RANDOM13.824
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.060.16-0.12
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.611
r_dihedral_angle_4_deg18.228
r_dihedral_angle_3_deg16.366
r_dihedral_angle_1_deg5.942
r_scangle_it2.341
r_scbond_it1.586
r_angle_refined_deg1.289
r_mcangle_it0.923
r_mcbond_it0.716
r_nbtor_refined0.305
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.611
r_dihedral_angle_4_deg18.228
r_dihedral_angle_3_deg16.366
r_dihedral_angle_1_deg5.942
r_scangle_it2.341
r_scbond_it1.586
r_angle_refined_deg1.289
r_mcangle_it0.923
r_mcbond_it0.716
r_nbtor_refined0.305
r_chiral_restr0.209
r_nbd_refined0.198
r_symmetry_vdw_refined0.173
r_xyhbond_nbd_refined0.124
r_symmetry_hbond_refined0.1
r_metal_ion_refined0.063
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2078
Nucleic Acid Atoms
Solvent Atoms217
Heterogen Atoms28

Software

Software
Software NamePurpose
CrysalisProdata collection
AMoREphasing
REFMACrefinement
CrysalisProdata reduction
CrysalisProdata scaling