X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP2931.5 M SODIUM CHLORIDE
Crystal Properties
Matthews coefficientSolvent content
2.0740.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 31.7α = 90
b = 53.5β = 99
c = 71.6γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 X 2MBENT MIRROR2018-05-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-20.873ESRFID23-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.67076.60.2375.33.512579-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.7279.10.8392.75.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1B2K2.631.33526026174.580.201170.198720.25239RANDOM18.597
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.81-0.17-0.13-0.59
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg28.355
r_dihedral_angle_3_deg17.825
r_dihedral_angle_4_deg15.539
r_dihedral_angle_1_deg8.851
r_long_range_B_refined5.161
r_long_range_B_other5.098
r_scangle_other1.966
r_mcangle_it1.797
r_mcangle_other1.796
r_angle_refined_deg1.494
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg28.355
r_dihedral_angle_3_deg17.825
r_dihedral_angle_4_deg15.539
r_dihedral_angle_1_deg8.851
r_long_range_B_refined5.161
r_long_range_B_other5.098
r_scangle_other1.966
r_mcangle_it1.797
r_mcangle_other1.796
r_angle_refined_deg1.494
r_angle_other_deg1.431
r_scbond_it1.142
r_scbond_other1.141
r_mcbond_other1.017
r_chiral_restr0.07
r_bond_refined_d0.008
r_gen_planes_refined0.008
r_bond_other_d0.002
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2000
Nucleic Acid Atoms
Solvent Atoms122
Heterogen Atoms19

Software

Software
Software NamePurpose
XDSdata reduction
Aimlessdata scaling
PHASERphasing
REFMACrefinement