6OVC
hMcl1 inhibitor complex
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D X-filtered NOESY | 0.5 mM [U-99% 13C; U-99% 15N] human Mcl1 protein, 0.5 mM small molecule, 20 mM sodium phosphate, 50 mM sodium chloride | 90% H2O/10% D2O | 50 mM | 7.4 | 1 atm | 298 | Bruker AVANCE 800 |
2 | 2D X filtered NOESY-HSQC | 0.5 mM [U-99% 13C; U-99% 15N] human Mcl1 protein, 0.5 mM small molecule, 20 mM sodium phosphate, 50 mM sodium chloride | 90% H2O/10% D2O | 50 mM | 7.4 | 1 atm | 298 | Bruker AVANCE 800 |
3 | 2D HSQC-NOESY | 0.5 mM [U-99% 13C; U-99% 15N] hMcl1 protein, 0.25 mg/L small molecule | 90% H2O/10% D2O | 50 mM | 7.4 | 1 atm | 310 | Bruker AVANCE 800 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | The author states that the small molecule - protein complex was obtained by ligand-protein NOE constraints docking of a small molecule to a previously obtained NMR structure of the apo form (PDB entry 2MHS). | MOE |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 1 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | TopSpin | 3.0 | Bruker Biospin |
2 | structure calculation | Matlab | MathWorks, Inc. | |
3 | refinement | MOE | CCG |