X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.32981.4 M K2HPO4 0.07 M Na2H2PO4 pH 8.3 5% PEG 400
Crystal Properties
Matthews coefficientSolvent content
4.874.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 159.26α = 90
b = 159.26β = 90
c = 159.26γ = 90
Symmetry
Space GroupI 2 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 300 mm CCD2016-03-23MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-F0.97872APS21-ID-F

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.546.0299.970.195828.4821.72335148.08
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.5012.5911.358

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.50145.9723351200499.970.204220.202320.22456RANDOM39.58
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.358
r_dihedral_angle_4_deg21.029
r_dihedral_angle_3_deg15.29
r_long_range_B_refined9.883
r_long_range_B_other9.878
r_scangle_other8.317
r_dihedral_angle_1_deg6.265
r_scbond_it5.716
r_scbond_other5.715
r_mcangle_other5.196
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.358
r_dihedral_angle_4_deg21.029
r_dihedral_angle_3_deg15.29
r_long_range_B_refined9.883
r_long_range_B_other9.878
r_scangle_other8.317
r_dihedral_angle_1_deg6.265
r_scbond_it5.716
r_scbond_other5.715
r_mcangle_other5.196
r_mcangle_it5.194
r_mcbond_it3.573
r_mcbond_other3.56
r_angle_refined_deg1.501
r_angle_other_deg1.06
r_chiral_restr0.084
r_bond_refined_d0.013
r_gen_planes_refined0.005
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2228
Nucleic Acid Atoms
Solvent Atoms27
Heterogen Atoms55

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
AutoSolphasing