GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6MZF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6MZF_GDP_Y_600 | 45% | 48% | 0.204 | 0.937 | 0.95 | 1.06 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_R_600 | 42% | 48% | 0.218 | 0.94 | 0.93 | 1.07 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_D_600 | 41% | 48% | 0.232 | 0.948 | 0.94 | 1.07 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_P_600 | 35% | 47% | 0.269 | 0.961 | 0.93 | 1.14 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_B_600 | 31% | 48% | 0.278 | 0.95 | 0.93 | 1.1 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_I_600 | 31% | 47% | 0.265 | 0.935 | 0.93 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_W_600 | 31% | 47% | 0.269 | 0.939 | 0.96 | 1.09 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_K_600 | 26% | 47% | 0.239 | 0.88 | 0.96 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 19% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
