Ligand validation:6PPG

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 6PPG designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6PPG_NAG_F_201	14%	33%	0.235	0.782	0.51	2.23	-	4	0	0	100%	0.9333
6PPG_NAG_G_201	8%	20%	0.236	0.707	0.71	2.8	-	5	0	0	100%	0.9333
6HGO_NAG_D_201	65%	69%	0.098	0.901	0.3	0.85	-	1	1	0	100%	0.9333
5NAN_NAG_E_201	48%	75%	0.138	0.882	0.39	0.57	-	-	0	0	100%	0.9333
3JVF_NAG_C_305	36%	43%	0.212	0.908	0.67	1.57	-	3	1	0	100%	0.9333
8RUU_NAG_Y_201	34%	13%	0.215	0.9	2.21	1.93	3	3	3	0	100%	0.9333
1JPY_NAG_Y_241	23%	44%	0.217	0.842	0.91	1.29	-	2	2	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.