RCSB Protein Data Bank

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin

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Sequence of

5 UGGAGAGUUU15 GAUCCUGGCU25 CAGGGUGAAC35 GCUGGCGGCG45 UGCCUAAGAC55 AUGCAAGUCG65 UGCGGGCCGC75 GGGGUUUUAC85 UCCGUGGUCA95 GCGGCGGACG105 GGUGAGUAAC115 GCGUGGGUGA125 CCUACCCGGA135 AGAGGGGGAC145 AACCCGGGGA155 AACUCGGGCU165 AAUCCCCCAU175 GUGGACCCGC185 CCCUUGGGGU195 GUGUCCAAAG205 GGCUUUGCCC215 GCUUCCGGAU225 GGGCCCGCGU235 CCCAUCAGCU245 AGUUGGUGGG255 GUAAUGGCCC265 ACCAAGGCGA275 CGACGGGUAG285 CCGGUCUGAG295 AGGAUGGCCG305 GCCACAGGGG315 CACUGAGACA325 CGGGCCCCAC335 UCCUACGGGA345 GGCAGCAGUU355 AGGAAUCUUC365 CGCAAUGGGC375 GCAAGCCUGA385 CGGAGCGACG395 CCGCUUGGAG405 GAAGAAGCCC415 UUCGGGGUGU425 AAACUCCUGA435 ACCCGGGACG445 AAACCCCCGA455 CGAGGGGACU465 GACGGUACCG475 GGGUAAUAGC485 GCCGGCCAAC495 UCCGUGCCAG505 CAGCCGCGGU515 AAUACGGAGG525 GCGCGAGCGU535 UACCCGGAUU545 CACUGGGCGU555 AAAGGGCGUG565 UAGGCGGCCU575 GGGGCGUCCC585 AUGUGAAAGA595 CCACGGCUCA605 ACCGUGGGGG615 AGCGUGGGAU625 ACGCUCAGGC635 UAGACGGUGG645 GAGAGGGUGG655 UGGAAUUCCC665 GGAGUAGCGG675 UGAAAUGCGC685 AGAUACCGGG695 AGGAACGCCG705 AUGGCGAAGG715 CAGCCACCUG725 GUCCACCCGU735 GACGCUGAGG745 CGCGAAAGCG755 UGGGGAGCAA765 ACCGGAUUAG775 AUACCCGGGU785 AGUCCACGCC795 CUAAACGAUG805 CGCGCUAGGU815 CUCUGGGUCU825 CCUGGGGGCC835 GAAGCUAACG845 CGUUAAGCGC855 GCCGCCUGGG865 GAGUACGGCC875 GCAAGGCUGA885 AACUCAAAGG895 AAUUGACGGG905 GGCCCGCACA915 AGCGGUGGAG925 CAUGUGGUUU935 AAUUCGAAGC945 AACGCGAAGA955 ACCUUACCAG965 GCCUUGACAU975 GCUAGGGAAC985 CCGGGUGAAA995 GCCUGGGGUG1005 CCCCGCGAGG1015 GGAGCCCUAG1025 CACAGGUGCU1035 GCAUGGCCGU1045 CGUCAGCUCG1055 UGCCGUGAGG1065 UGUUGGGUUA1075 AGUCCCGCAA1085 CGAGCGCAAC1095 CCCCGCCGUU1105 AGUUGCCAGC1115 GGUUCGGCCG1125 GGCACUCUAA1135 CGGGACUGCC1145 CGCGAAAGCG1155 GGAGGAAGGA1165 GGGGACGACG1175 UCUGGUCAGC1185 AUGGCCCUUA1195 CGGCCUGGGC1205 GACACACGUG1215 CUACAAUGCC1225 CACUACAAAG1235 CGAUGCCACC1245 CGGCAACGGG1255 GAGCUAAUCG1265 CAAAAAGGUG1275 GGCCCAGUUC1285 GGAUUGGGGU1295 CUGCAACCCG1305 ACCCCAUGAA1315 GCCGGAAUCG1325 CUAGUAAUCG1335 CGGAUCAGCC1345 AUGCCGCGGU1355 GAAUACGUUC1365 CCGGGCCUUG1375 UACACACCGC1385 CCGUCACGCC1395 AUGGGAGCGG1405 GCUCUACCCG1415 AAGUCGCCGG1425 GAGCCUACGG1435 GCAGGCGCCG1445 AGGGUAGGGC1455 CCGUGACUGG1465 GGCGAAGUCG1475 UAACAAGGUA1485 GCUGUACCGG1495 AAGGUGCGGC1505 UGGAUCACUU1519 UCU

Type

Asm Id

Dynamic Bonds