1A5J
CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1a5ja1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Myb/SANT domain | b-Myb DNA binding domain | chicken (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Myb/SANT domain | 8002310 | 4000317 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Myb/SANT domain | 8002311 | 4000317 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Homeodomain-like | 8057570 | 3000001 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Homeodomain-like | 8057571 | 3000001 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Myb_DNA-binding | e1a5jA3 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Myb_DNA-binding | ECOD (1.6) |
A | Myb_DNA-binding_2 | e1a5jA4 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Myb_DNA-binding_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13921 | Myb-like DNA-binding domain (Myb_DNA-bind_6) | Myb-like DNA-binding domain | This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015395 | C-myb, C-terminal | Domain | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR001005 | SANT/Myb domain | Domain | |
IPR017930 | Myb domain | Domain | |
IPR050560 | Transcription factors Myb-like | Family |