1B6R
N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE FROM E. COLI
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1b6ra1 | All beta proteins | Barrel-sandwich hybrid | Rudiment single hybrid motif | BC C-terminal domain-like | N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1b6ra2 | Alpha and beta proteins (a/b) | PreATP-grasp domain | PreATP-grasp domain | BC N-terminal domain-like | N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1b6ra3 | Alpha and beta proteins (a+b) | ATP-grasp | Glutathione synthetase ATP-binding domain-like | BC ATP-binding domain-like | N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8041115 | 3000094 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PreATP-grasp domain | 8041114 | 3001680 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Rudiment single hybrid motif | 8041112 | 3001910 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ATP-grasp | e1b6rA1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: ATP-grasp | ECOD (1.6) |
A | PRK06019_2 | e1b6rA2 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: CO dehydrogenase molybdoprotein N-domain-like | F: PRK06019_2 | ECOD (1.6) |
A | 2-Hacid_dh_C_2 | e1b6rA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: 2-Hacid_dh_C_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.20 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 3.30.470.20 | Alpha Beta | 2-Layer Sandwich | D-amino Acid Aminotransferase | Chain A, domain 1 | CATH (4.3.0) |
A | 3.30.1490.20 | Alpha Beta | 2-Layer Sandwich | Dna Ligase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22660 | Ribonucleotide synthetase preATP-grasp domain (RS_preATP-grasp-like) | Ribonucleotide synthetase preATP-grasp domain | This domain precedes the ATP-grasp domain in a number of ribonucleotide synthetases [1-5]. | Domain | |
PF02222 | ATP-grasp domain (ATP-grasp) | ATP-grasp domain | - | Family | |
PF17769 | Phosphoribosylaminoimidazole carboxylase C-terminal domain (PurK_C) | Phosphoribosylaminoimidazole carboxylase C-terminal domain | This entry represents the C-terminal domain of the PurK enzyme. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011761 | ATP-grasp fold | Domain | |
IPR054350 | PurT/PurK-like, preATP-grasp domain | Domain | |
IPR013815 | ATP-grasp fold, subdomain 1 | Homologous Superfamily | |
IPR003135 | ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type | Domain | |
IPR005875 | Phosphoribosylaminoimidazole carboxylase, ATPase subunit | Domain | |
IPR016185 | Pre-ATP-grasp domain superfamily | Homologous Superfamily | |
IPR011054 | Rudiment single hybrid motif | Homologous Superfamily | |
IPR040686 | Phosphoribosylaminoimidazole carboxylase, C-terminal domain | Domain |