1GYH

Structure of D158A Cellvibrio cellulosa alpha-L-arabinanase mutant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1gyha_	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	alpha-L-arabinanase	(Cellvibrio japonicus ) [TaxId: 155077 ],	SCOPe (2.08)
B	d1gyhb_	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	alpha-L-arabinanase	(Cellvibrio japonicus ) [TaxId: 155077 ],	SCOPe (2.08)
C	d1gyhc_	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	alpha-L-arabinanase	(Cellvibrio japonicus ) [TaxId: 155077 ],	SCOPe (2.08)
D	d1gyhd_	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	alpha-L-arabinanase	(Cellvibrio japonicus ) [TaxId: 155077 ],	SCOPe (2.08)
E	d1gyhe_	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	alpha-L-arabinanase	(Cellvibrio japonicus ) [TaxId: 155077 ],	SCOPe (2.08)
F	d1gyhf_	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	alpha-L-arabinanase	(Cellvibrio japonicus ) [TaxId: 155077 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	alpha-L-arabinanase-like	8026929	4002120	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Furanosidase-like	8039308	3000845	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Furanosidase-like	8039308	3000845	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Furanosidase-like	8039308	3000845	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Furanosidase-like	8039308	3000845	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Furanosidase-like	8039308	3000845	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Furanosidase-like	8039308	3000845	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Glyco_hydro_43	e1gyhA1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 5-bladed	F: Glyco_hydro_43	ECOD (1.6)
B	Glyco_hydro_43	e1gyhB1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 5-bladed	F: Glyco_hydro_43	ECOD (1.6)
C	Glyco_hydro_43	e1gyhC1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 5-bladed	F: Glyco_hydro_43	ECOD (1.6)
D	Glyco_hydro_43	e1gyhD1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 5-bladed	F: Glyco_hydro_43	ECOD (1.6)
E	Glyco_hydro_43	e1gyhE1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 5-bladed	F: Glyco_hydro_43	ECOD (1.6)
F	Glyco_hydro_43	e1gyhF1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 5-bladed	F: Glyco_hydro_43	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)
B	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)
C	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)
D	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)
E	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)
F	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF04616	Glycosyl hydrolases family 43 (Glyco_hydro_43)	Glycosyl hydrolases family 43	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A	alpha-L-arabinofuranosidase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity arabinan endo-1,5-alpha-L-arabinosidase activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process catabolic process carbohydrate catabolic process primary metabolic process macromolecule catabolic process arabinan metabolic process arabinan catabolic process polysaccharide metabolic process polysaccharide catabolic process metabolic process cellular process macromolecule metabolic process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR050727	Glycosyl hydrolase 43 family arabinanases	Family
A, B, C, D, E A, B, C, D, E, F	IPR023296	Glycosyl hydrolase, five-bladed beta-propeller domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR006710	Glycoside hydrolase, family 43	Family
A, B, C, D, E A, B, C, D, E, F	IPR016840	Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.