1H3G | pdb_00001h3g

Cyclomaltodextrinase from Flavobacterium sp. No. 92: from DNA sequence to protein structure

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1h3gb1	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	E-set domains of sugar-utilizing enzymes	Cyclomaltodextrinase, N-terminal domain	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)
B	d1h3gb2	All beta proteins	Glycosyl hydrolase domain	Glycosyl hydrolase domain	alpha-Amylases, C-terminal beta-sheet domain	Cyclomaltodextrinase	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)
B	d1h3gb3	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	Cyclomaltodextrinase, central domain	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)
B	d1h3gb4	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)
A	d1h3ga1	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	E-set domains of sugar-utilizing enzymes	Cyclomaltodextrinase, N-terminal domain	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)
A	d1h3ga2	All beta proteins	Glycosyl hydrolase domain	Glycosyl hydrolase domain	alpha-Amylases, C-terminal beta-sheet domain	Cyclomaltodextrinase	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)
A	d1h3ga3	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	Cyclomaltodextrinase, central domain	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)
A	d1h3ga4	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Flavobacterium sp. 92 ) [TaxId: 197856 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	E set domains	8054931	3000070	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Glycosyl hydrolase domain-like	8035825	3001528	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	(Trans)glycosidases	8035829	3000313	SCOP2B (2022-06-29)
A	SCOP2 Family	alpha-Amylases, C-terminal beta-sheet domain	8023445	4002636	SCOP2 (2022-06-29)
A	SCOP2 Family	Amylase, catalytic domain	8023449	4003138	SCOP2 (2022-06-29)
A	SCOP2 Family	E-set domains of sugar-utilizing enzymes	8054930	4007565	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Glycosyl hydrolase domain-like	8035825	3001528	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	(Trans)glycosidases	8035829	3000313	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	E set domains	8054931	3000070	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Copper-bind	e1h3gB1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (develop294)
B	Alpha-L-AF_C	e1h3gB2	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Alpha-L-AF_C	ECOD (develop294)
B	Alpha-amylase	e1h3gB3	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: Alpha-amylase	ECOD (develop294)
A	Cyc-maltodext_N	e1h3gA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cyc-maltodext_N	ECOD (develop294)
A	Cyc-maltodext_C	e1h3gA2	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: Cyc-maltodext_C	ECOD (develop294)
A	Alpha-amylase	e1h3gA3	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Alpha-amylase	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
B	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
B	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
A	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
A	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Cyclomaltodextrinase	cyclomaltodextrinase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR015171	Cyclomaltodextrinase, N-terminal	Domain
A, B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, B	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A, B	IPR006047	Glycosyl hydrolase family 13, catalytic domain	Domain
A, B	IPR019492	Cyclo-malto-dextrinase, C-terminal	Domain
A, B	IPR013780	Glycosyl hydrolase, all-beta	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.