1HXQ
THE STRUCTURE OF NUCLEOTIDYLATED GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE FROM ESCHERICHIA COLI AT 1.86 ANGSTROMS RESOLUTION
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1hxqa1 | Alpha and beta proteins (a+b) | HIT-like | HIT-like | Hexose-1-phosphate uridylyltransferase | Galactose-1-phosphate uridylyltransferase | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1hxqb1 | Alpha and beta proteins (a+b) | HIT-like | HIT-like | Hexose-1-phosphate uridylyltransferase | Galactose-1-phosphate uridylyltransferase | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | HIT-like | 8034400 | 3000223 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | HIT-like | 8034403 | 3000223 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | HIT-like | 8034400 | 3000223 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | HIT-like | 8034403 | 3000223 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GalP_UDP_transf | e1hxqA1 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: GalP_UDP_transf | ECOD (1.6) |
A | GalP_UDP_tr_C | e1hxqA2 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: GalP_UDP_tr_C | ECOD (1.6) |
B | GalP_UDP_transf | e1hxqB1 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: GalP_UDP_transf | ECOD (1.6) |
B | GalP_UDP_tr_C | e1hxqB2 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: GalP_UDP_tr_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
B | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01087 | Galactose-1-phosphate uridyl transferase, N-terminal domain (GalP_UDP_transf) | Galactose-1-phosphate uridyl transferase, N-terminal domain | SCOP reports fold duplication with C-terminal domain. Both involved in Zn and Fe binding. | Domain | |
PF02744 | Galactose-1-phosphate uridyl transferase, C-terminal domain (GalP_UDP_tr_C) | Galactose-1-phosphate uridyl transferase, C-terminal domain | SCOP reports fold duplication with N-terminal domain. Both involved in Zn and Fe binding. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001937 | Galactose-1-phosphate uridyl transferase, class I | Family | |
IPR019779 | Galactose-1-phosphate uridyl transferase, class I His-active site | Active Site | |
IPR036265 | HIT-like superfamily | Homologous Superfamily | |
IPR005849 | Galactose-1-phosphate uridyl transferase, N-terminal | Domain | |
IPR005850 | Galactose-1-phosphate uridyl transferase, C-terminal | Domain |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
UDP-glucose-hexose-1-phosphate uridylyltransferase M-CSA #88 | Nucleotidyltransferases catalyse the covalent modification of a variety of biological molecules. These reactions are crucial for the synthesis of coenzymes, cyclic nucleotides, polynucleotides, and nucleotide sugars. These reactions involve substitutions at the R -phosphorus of a nucleotidyl donor substrate and result in displacement of a phosphoryl ester or pyrophosphate. Substrates for such reactions may include nucleoside di- or triphosphates, as well as nucleotide sugars, such as UDP-Glc. Galactose-1-phosphate uridylyltransferase (hexose-1-phosphate uridylyltransferase) catalyses the exchange of the UMP moiety between the hexose 1-phosphates of Glc and Gal and their corresponding UDP-sugar. The enzyme is distinct among nucleotidyl transferases that use phosphates as acceptor groups in that it is the only one that does not utilise nucleoside di- or triphosphates as the nucleotidyl donor substrate. The reaction is part of the Leloir pathway of galactose metabolism required for the normal equilibration of UDP-hexoses among most organisms. Deficiencies in uridylyltransferase activity culminate in the metabolic disease galactosemia, which occurs as an autosomal recessive trait. | Defined by 8 residues: CYS:A-52CYS:A-55HIS:A-115ASN:A-153SER:A-161HIS:A-164HIS:A-166GLN:A-168 | EC: 2.7.7.12 (PDB Primary Data) |