1IJ5 | pdb_00001ij5

METAL-FREE STRUCTURE OF MULTIDOMAIN EF-HAND PROTEIN, CBP40, FROM TRUE SLIME MOLD

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1ij5a_ All alpha proteins EF Hand-like EF-hand Cbp40 (plasmodial specific CaII-binding protein LAV1-2) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) (Badhamia polycephala ) [TaxId: 5791 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCbp40 (plasmodial specific CaII-binding protein LAV1-2) 8030071 4002324 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyEF-hand 8042450 3001983 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEF-hand_1, EF-hand_5, EF-hand_7e1ij5A1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: Phage tail proteinsF: EF-hand_1, EF-hand_5, EF-hand_7ECOD (develop294)
AVCPO_2nde1ij5A4 A: alpha bundlesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: VCPO_2ndECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.58.90 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
A1.10.238.10 Mainly Alpha Orthogonal Bundle Recoverin domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
PLASMODIAL SPECIFIC LAV1-2 PROTEIN - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018247EF-Hand 1, calcium-binding siteBinding Site
IPR002048EF-hand domainDomain
IPR011992EF-hand domain pairHomologous Superfamily