1IWM

Crystal Structure of the Outer Membrane Lipoprotein Receptor, LolB

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1iwma_	All beta proteins	LolA-like prokaryotic lipoproteins and lipoprotein localization factors	Prokaryotic lipoproteins and lipoprotein localization factors	Outer membrane lipoprotein receptor LolB	Outer membrane lipoprotein receptor LolB	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1iwmb_	All beta proteins	LolA-like prokaryotic lipoproteins and lipoprotein localization factors	Prokaryotic lipoproteins and lipoprotein localization factors	Outer membrane lipoprotein receptor LolB	Outer membrane lipoprotein receptor LolB	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Outer membrane lipoprotein receptor LolB	8032196	4003964	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	LolA-like	8044574	3001964	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	LolA-like	8044574	3001964	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	LolB	e1iwmA1	A: beta meanders	X: Lipoprotein localization factors LolAB	H: Lipoprotein localization factors LolAB (From Topology)	T: Lipoprotein localization factors LolAB	F: LolB	ECOD (1.6)
B	LolB	e1iwmB1	A: beta meanders	X: Lipoprotein localization factors LolAB	H: Lipoprotein localization factors LolAB (From Topology)	T: Lipoprotein localization factors LolAB	F: LolB	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.50.20.10	Mainly Beta	Clam	outer membrane lipoprotein receptor (LolB), chain A	Lipoprotein localisation LolA/LolB/LppX	CATH (4.3.0)
B	2.50.20.10	Mainly Beta	Clam	outer membrane lipoprotein receptor (LolB), chain A	Lipoprotein localisation LolA/LolB/LppX	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03550	Outer membrane lipoprotein LolB (LolB)	Outer membrane lipoprotein LolB	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Outer Membrane Lipoprotein LolB	-	protein localization cellular localization localization within membrane protein localization to membrane lipoprotein localization to membrane localization cellular macromolecule localization macromolecule localization cellular process lipoprotein localization lipoprotein localization to outer membrane lipoprotein metabolic process metabolic process primary metabolic process protein localization cellular localization localization within membrane protein localization to membrane lipoprotein localization to membrane localization cellular macromolecule localization macromolecule localization cellular process lipoprotein localization lipoprotein localization to outer membrane lipoprotein metabolic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process establishment of protein localization nitrogen compound transport transport establishment of localization protein transport	cellular anatomical structure outer membrane-bounded periplasmic space cell envelope periplasmic space cell periphery cell outer membrane external encapsulating structure membrane outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR050458	Outer-membrane lipoprotein LolB	Family
A, B	IPR004565	Outer membrane lipoprotein LolB	Family
A, B	IPR029046	Lipoprotein localisation LolA/LolB/LppX	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.