1M1X | pdb_00001m1x

CRYSTAL STRUCTURE OF THE EXTRACELLULAR SEGMENT OF INTEGRIN ALPHA VBETA3 BOUND TO MN2+


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyIntegrin alpha N-terminal domain 8029185 4003137 SCOP2 (2022-06-29)
ASCOP2 FamilyIntegrin domains 8055304 4007553 SCOP2 (2022-06-29)
ASCOP2 FamilyIntegrin domains 8055488 4007553 SCOP2 (2022-06-29)
ASCOP2 FamilyIntegrin domains 8055490 4007553 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyIntegrin alpha N-terminal domain 8041564 3000314 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyIntegrin domains 8055305 3002062 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyIntegrin domains 8055489 3002062 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyIntegrin domains 8055491 3002062 SCOP2 (2022-06-29)
BSCOP2 FamilyIntegrin beta tail domain 8029188 4003418 SCOP2 (2022-06-29)
BSCOP2 FamilyIntegrin beta EGF-like domains 8029189 4003627 SCOP2 (2022-06-29)
BSCOP2 FamilyIntegrin beta EGF-like domains 8029190 4003627 SCOP2 (2022-06-29)
BSCOP2 FamilyIntegrin domains 8055551 4007553 SCOP2 (2022-06-29)
BSCOP2 FamilyIntegrin A (or I) domain 8055553 4000639 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyIntegrin beta tail domain 8041567 3000823 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyEGF/Laminin-like 8041568 3000412 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyEGF/Laminin-like 8041569 3000412 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyIntegrin domains 8055552 3002062 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyvWA-like 8055554 3000832 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACopper-binde1m1xA1 A: a/b three-layered sandwichesX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Copper-bindECOD (v294.1)
ALactonase, YNCE, choice_anch_Ie1m1xA4 A: a/b three-layered sandwichesX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Lactonase, YNCE, choice_anch_IECOD (v294.1)
BCopper-binde1m1xB1 A: a/b three-layered sandwichesX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Copper-bindECOD (v294.1)
BRF-1e1m1xB2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: RF-1ECOD (v294.1)
BSushie1m1xB3 A: a/b three-layered sandwichesX: EGF-likeH: LDL receptor-like moduleT: LDL receptor-like moduleF: SushiECOD (v294.1)
BSNO, Peptidase_S51e1m1xB5 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: SNO, Peptidase_S51ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
INTEGRIN-ALPHA-V_BETA-3 INTEGRIN-ALPHA-V Homo sapiens (human) ALPHA-V A-LIKE-DOMAIN B-Propeller, F1-LIKE-DOMAIN Thigh, F1-LIKE-DOMAIN Calf-1, F2-LIKE-DOMAIN Calf-2 RPI INTEGRIN-ALPHA-V_BETA-3 IMGT (202611-0)
INTEGRIN-ALPHA-V_BETA-3 INTEGRIN-BETA-3 Homo sapiens (human) BETA-3 P-LIKE-DOMAIN PSI, Y-LIKE-DOMAIN Hybrid-1, B-LIKE-DOMAIN BETA-1, Y-LIKE-DOMAIN Hybrid-2, E-LIKE-DOMAIN EGF-1, E-LIKE-DOMAIN EGF-2, E-LIKE-DOMAIN EGF-3, E-LIKE-DOMAIN EGF-4, T-LIKE-DOMAIN B-Tail RPI INTEGRIN-ALPHA-V_BETA-3 IMGT (202611-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF20805Integrin alpha Ig-like domain 2 (Integrin_A_Ig_2)Integrin alpha Ig-like domain 2This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain
PF01839FG-GAP repeat (FG-GAP)FG-GAP repeat- Repeat
PF08441Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1)Integrin alpha Ig-like domain 1This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain
PF20806Integrin alpha Ig-like domain 3 (Integrin_A_Ig_3)Integrin alpha Ig-like domain 3This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain
PF00362Integrin beta chain VWA domain (Integrin_beta)Integrin beta chain VWA domainIntegrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. Domain
PF07974EGF-like domain (EGF_2)EGF-like domainThis family contains EGF domains found in a variety of extracellular proteins. Domain
PF07965Integrin beta tail domain (Integrin_B_tail)Integrin beta tail domainThis is the beta tail domain of the Integrin protein. Integrins are receptors which are involved in cell-cell and cell-extracellular matrix interactions. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Integrin alpha-V
Integrin beta-3

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP06756
PharosP05106