1M2X
Crystal Structure of the metallo-beta-lactamase BlaB of Chryseobacterium meningosepticum in complex with the inhibitor D-captopril
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- AMR Gene: CARD Annotation
- AMR Gene Family: CARD Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1m2xa_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | Zn metallo-beta-lactamase | Zn metallo-beta-lactamase | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
B | d1m2xb_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | Zn metallo-beta-lactamase | Zn metallo-beta-lactamase | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
C | d1m2xc_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | Zn metallo-beta-lactamase | Zn metallo-beta-lactamase | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
D | d1m2xd_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | Zn metallo-beta-lactamase | Zn metallo-beta-lactamase | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Zn metallo-beta-lactamase | 8020282 | 4002289 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Metallo-hydrolase/oxidoreductase | 8032662 | 3001057 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8032662 | 3001057 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8032662 | 3001057 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8032662 | 3001057 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lactamase_B | e1m2xA1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
B | Lactamase_B | e1m2xB1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
C | Lactamase_B | e1m2xC1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
D | Lactamase_B | e1m2xD1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
B | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
C | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
D | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
AMR Gene: CARD Annotation CARD Database Homepage
Chains | Accession | Short Name | Description | Provenance Source (Version) |
---|---|---|---|---|
ARO:3000579 | Chryseobacterium meningosepticum BlaB | This BlaB specific to Chryseobacterium meningosepticum mediates resistance against many beta-lactam antibiotics, notably penams and carbapenems. | CARD (3.3.0) |
AMR Gene Family: CARD Annotation CARD Database Homepage
Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
---|---|---|---|---|---|
ARO:3004201 | BlaB beta-lactamase | carbapenem, penam | antibiotic inactivation | CARD (3.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
class B carbapenemase BlaB-1 |
|