1PCV | pdb_00001pcv

Crystal structure of osmotin, a plant antifungal protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1pcva_	All beta proteins	Osmotin, thaumatin-like protein	Osmotin, thaumatin-like protein	Osmotin, thaumatin-like protein	Osmotin	(Nicotiana tabacum ) [TaxId: 4097 ],	SCOPe (2.08)
B	d1pcvb_	All beta proteins	Osmotin, thaumatin-like protein	Osmotin, thaumatin-like protein	Osmotin, thaumatin-like protein	Osmotin	(Nicotiana tabacum ) [TaxId: 4097 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Osmotin, thaumatin-like protein	8026150	4002584	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Osmotin/thaumatin-like	8038529	3001451	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Osmotin/thaumatin-like	8038529	3001451	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e1pcvA1	A: Ntn/PP2C	X: Ntn	H: Penicillin acylase, catalytic domain	T: Thaumatin	F:	ECOD (20:10:01)
B		e1pcvB1	A: Ntn/PP2C	X: Ntn	H: Penicillin acylase, catalytic domain	T: Thaumatin	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.110.10	Mainly Beta	Sandwich	Thaumatin	Thaumatin	CATH (4.3.0)
B	2.60.110.10	Mainly Beta	Sandwich	Thaumatin	Thaumatin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00314	Thaumatin family (Thaumatin)	Thaumatin family		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	osmotin	-	response to stimulus defense response response to stress	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle vacuole cytoplasm intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR017949	Thaumatin, conserved site	Conserved Site
A, B	IPR001938	Thaumatin family	Family
A, B	IPR037176	Osmotin/thaumatin-like superfamily	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Monotopic/peripheral	All beta monotopic/peripheral	Membrane attack complex superfamily	Thaumatin

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.