1PNF
PNGASE F COMPLEX WITH DI-N-ACETYLCHITOBIOSE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1pnfa1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | PHM/PNGase F | Glycosyl-asparaginase | Peptide:N-glycosidase F, PNGase F | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | N-glycanase_C | e1pnfA2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: N-glycanase_C | ECOD (1.6) |
A | N-glycanase_N | e1pnfA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: N-glycanase_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.230 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09113 | Peptide-N-glycosidase F, C terminal (N-glycanase_C) | Peptide-N-glycosidase F, C terminal | Members of this family adopt an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. They are similar in topology to many viral capsid proteins, as well as lectins and several glucanases. The doma ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR053251 | Glycoprotein-specific N-glycanase | Family | |
IPR008977 | PHM/PNGase F domain superfamily | Homologous Superfamily | |
IPR015197 | Peptide-N-glycosidase F, C-terminal | Domain | |
IPR014784 | Copper type II, ascorbate-dependent monooxygenase-like, C-terminal | Homologous Superfamily |