Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ed1qpre1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Ed1qpre2 Alpha and beta proteins (a+b) alpha/beta-Hammerhead Nicotinate/Quinolinate PRTase N-terminal domain-like NadC N-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Ad1qpra1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Ad1qpra2 Alpha and beta proteins (a+b) alpha/beta-Hammerhead Nicotinate/Quinolinate PRTase N-terminal domain-like NadC N-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Bd1qprb1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Bd1qprb2 Alpha and beta proteins (a+b) alpha/beta-Hammerhead Nicotinate/Quinolinate PRTase N-terminal domain-like NadC N-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Cd1qprc1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Cd1qprc2 Alpha and beta proteins (a+b) alpha/beta-Hammerhead Nicotinate/Quinolinate PRTase N-terminal domain-like NadC N-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Dd1qprd1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Dd1qprd2 Alpha and beta proteins (a+b) alpha/beta-Hammerhead Nicotinate/Quinolinate PRTase N-terminal domain-like NadC N-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Fd1qprf1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)
Fd1qprf2 Alpha and beta proteins (a+b) alpha/beta-Hammerhead Nicotinate/Quinolinate PRTase N-terminal domain-like NadC N-terminal domain-like Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyNicotinate/Quinolinate PRTase N-terminal domain-like 8035013 3000867 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyNicotinate/Quinolinate PRTase C-terminal domain-like 8043826 3000603 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNicotinate/Quinolinate PRTase N-terminal domain-like 8035013 3000867 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNicotinate/Quinolinate PRTase C-terminal domain-like 8043826 3000603 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNicotinate/Quinolinate PRTase C-terminal domain-like 8043826 3000603 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNicotinate/Quinolinate PRTase N-terminal domain-like 8035013 3000867 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNicotinate/Quinolinate PRTase N-terminal domain-like 8035013 3000867 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNicotinate/Quinolinate PRTase C-terminal domain-like 8043826 3000603 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyNicotinate/Quinolinate PRTase C-terminal domain-like 8043826 3000603 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyNicotinate/Quinolinate PRTase N-terminal domain-like 8035013 3000867 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyNicotinate/Quinolinate PRTase N-terminal domain-like 8035013 3000867 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyNicotinate/Quinolinate PRTase C-terminal domain-like 8043826 3000603 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EQRPTase_Ne1qprE1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Nicotinate/Quinolinate PRTase N-terminal domain-likeF: QRPTase_NECOD (1.6)
EQRPTase_Ce1qprE2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: QRPTase_CECOD (1.6)
AQRPTase_Ne1qprA1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Nicotinate/Quinolinate PRTase N-terminal domain-likeF: QRPTase_NECOD (1.6)
AQRPTase_Ce1qprA2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: QRPTase_CECOD (1.6)
BQRPTase_Ne1qprB1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Nicotinate/Quinolinate PRTase N-terminal domain-likeF: QRPTase_NECOD (1.6)
BQRPTase_Ce1qprB2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: QRPTase_CECOD (1.6)
CQRPTase_Ne1qprC1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Nicotinate/Quinolinate PRTase N-terminal domain-likeF: QRPTase_NECOD (1.6)
CQRPTase_Ce1qprC2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: QRPTase_CECOD (1.6)
DQRPTase_Ne1qprD1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Nicotinate/Quinolinate PRTase N-terminal domain-likeF: QRPTase_NECOD (1.6)
DQRPTase_Ce1qprD2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: QRPTase_CECOD (1.6)
FQRPTase_Ne1qprF1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Nicotinate/Quinolinate PRTase N-terminal domain-likeF: QRPTase_NECOD (1.6)
FQRPTase_Ce1qprF2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: QRPTase_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02749Quinolinate phosphoribosyl transferase, N-terminal domain (QRPTase_N)Quinolinate phosphoribosyl transferase, N-terminal domainQuinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase EC:2.4.2.19 is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl ...Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase EC:2.4.2.19 is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [1,2]. The QA substrate is bound between the C-terminal domain of one subunit, and the N-terminal domain of the other. The N-terminal domain has an alpha/beta hammerhead fold.
Domain
A, B, C, D, E
PF01729Quinolinate phosphoribosyl transferase, C-terminal domain (QRPTase_C)Quinolinate phosphoribosyl transferase, C-terminal domainQuinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase EC:2.4.2.19 is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl ...Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase EC:2.4.2.19 is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [1,2]. The QA substrate is bound between the C-terminal domain of one subunit, and the N-terminal domain of the other. The C-terminal domain has a 7 beta-stranded TIM barrel-like fold.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
QUINOLINIC ACID PHOSPHORIBOSYLTRANSFERASE

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
A, B
nicotinate-nucleotide diphosphorylase (carboxylating) (type II)  M-CSA #8

Quinolinic acid phosphoribosyltransferase from Mycobacterium Tuberculosis (Mt-QAPRTase) is required for the de novo biosynthesis of NAD in both prokaryotes and eukaryotes (equivalent enzyme). The enzyme catalyses the reaction between quinolinic acid (QA) and 5-phosphoribosyl-1-pyrophosphate (PRPP), to yield nicotinic acid mononucleotide (NAMN), pyrophosphate and CO2, the latter resulting from decarboxylation at position 2 of the quinolinate ring.

QAPRTase has been grouped with other phosphoribosyltransferases, (PRTases) that catalyse chemically similar phosphoribosyl transfer reactions using the substrate PRPP. The PRTases are involved in de novo and salvage reactions of nucleotide synthesis, as well as in histidine and tryptophan biosynthesis [PMID:9016724]. To date, crystal structures have been determined for several PRTase enzymes and all show a common 'PRTase fold' (the 'type I' fold) composed of a central beta sheet, of five beta strands, surrounded by alpha helices. The fold contains a common recognition motif of thirteen residues which is critical for PRPP binding and catalysis. However, as type II enzymes like Mt-QAPRTase lack the type I PRPP-binding motif and have TIM barrel-like structure, it becomes possible that there might be at least two different types of PRTase fold [PMID:9016724]. Despite their structural differences, it has been suggested TI and TII indeed still have the same catalytic mechanism but more work is needed to understand this fully.

Defined by 5 residues: LYS:A-139 [auth A-140]LYS:A-171 [auth A-172]GLU:A-200 [auth A-201]ASP:A-221 [auth A-222]ARG:B-104 [auth B-105]
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