1WS8

Crystal Structure of Mavicyanin from Cucurbita pepo medullosa (Zucchini)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1ws8a_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)
B	d1ws8b_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)
C	d1ws8c_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)
D	d1ws8d_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Plastocyanin/azurin-like	8031311	4002150	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Cupredoxins	8043689	3000886	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Cupredoxins	8043689	3000886	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Cupredoxins	8043689	3000886	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Cupredoxins	8043689	3000886	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Cu_bind_like	e1ws8A1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)
B	Cu_bind_like	e1ws8B1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)
C	Cu_bind_like	e1ws8C1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)
D	Cu_bind_like	e1ws8D1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)
B	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)
C	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)
D	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF02298	Plastocyanin-like domain (Cu_bind_like)	Plastocyanin-like domain	This family represents a domain found in flowering plants related to the copper binding protein plastocyanin. Some members of this family (eg Swiss:P93328) may not bind copper due to the lack of key residues.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	mavicyanin	electron transfer activity cation binding ion binding binding metal ion binding small molecule binding	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR003245	Phytocyanin domain	Domain
A, B, C, D	IPR039391	Phytocyanin-like	Family
A, B, C, D	IPR028871	Blue (type 1) copper protein, binding site	Binding Site
A, B, C, D	IPR008972	Cupredoxin	Homologous Superfamily
A, B, C, D	IPR041845	Mavicyanin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.