1WWW | pdb_00001www

NGF IN COMPLEX WITH DOMAIN 5 OF THE TRKA RECEPTOR


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth V]SCOP2 FamilyNeurotrophin 8026417 4003445 SCOP2 (2022-06-29)
A [auth V]SCOP2 SuperfamilyCystine-knot cytokines 8038796 3000846 SCOP2 (2022-06-29)
B [auth W]SCOP2B SuperfamilyCystine-knot cytokines 8038796 3000846 SCOP2B (2022-06-29)
D [auth Y]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8055582 3000071 SCOP2B (2022-06-29)
C [auth X]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8055582 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth V]e1wwwV1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: EGF_CAF:ECOD (20:10:01)
B [auth W]e1wwwW1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: EGF_CAF:ECOD (20:10:01)
D [auth Y]e1wwwY1 A: Ribosomal protein L25-likeX: 40S ribosomal protein S3A N-terminal domainH: 40S ribosomal protein S3A N-terminal domainT: Aminotran_3F:ECOD (20:10:01)
C [auth X]e1wwwX1 A: Ribosomal protein L25-likeX: 40S ribosomal protein S3A N-terminal domainH: 40S ribosomal protein S3A N-terminal domainT: Aminotran_3F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth V],
B [auth W]
PF00243Nerve growth factor family (NGF)Nerve growth factor familyDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth V],
B [auth W]
PROTEIN (NERVE GROWTH FACTOR)
C [auth X],
D [auth Y]
PROTEIN (TRKA RECEPTOR)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth V],
B [auth W]
IPR020408Nerve growth factor-likeFamily
A [auth V],
B [auth W]
IPR019846Nerve growth factor conserved siteConserved Site
A [auth V],
B [auth W]
IPR029034Cystine-knot cytokineHomologous Superfamily
A [auth V],
B [auth W]
IPR020437Nerve growth factor, beta subunit, mammalianFamily
A [auth V],
B [auth W]
IPR002072Nerve growth factor-relatedDomain
A [auth V],
B [auth W]
IPR020425Nerve growth factor, beta subunitFamily
C [auth X],
D [auth Y]
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth X],
D [auth Y]
IPR008266Tyrosine-protein kinase, active siteActive Site
C [auth X],
D [auth Y]
IPR020635Tyrosine-protein kinase, catalytic domainDomain
C [auth X],
D [auth Y]
IPR000719Protein kinase domainDomain
C [auth X],
D [auth Y]
IPR001611Leucine-rich repeatRepeat
C [auth X],
D [auth Y]
IPR020777Growth factor receptor NTRKFamily
C [auth X],
D [auth Y]
IPR031635Growth factor receptor NTRK, leucine rich repeat C-terminalDomain
C [auth X],
D [auth Y]
IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth X],
D [auth Y]
IPR000483Cysteine-rich flanking region, C-terminalDomain
C [auth X],
D [auth Y]
IPR007110Immunoglobulin-like domainDomain
C [auth X],
D [auth Y]
IPR017441Protein kinase, ATP binding siteBinding Site
C [auth X],
D [auth Y]
IPR040665Tyrosine kinase receptor A, transmembrane domainDomain
C [auth X],
D [auth Y]
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
C [auth X],
D [auth Y]
IPR002011Tyrosine-protein kinase, receptor class II, conserved siteConserved Site
C [auth X],
D [auth Y]
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
C [auth X],
D [auth Y]
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
C [auth X],
D [auth Y]
IPR050122Receptor Tyrosine KinaseFamily
C [auth X],
D [auth Y]
IPR020461High affinity nerve growth factor receptor NTRK1Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth V],
B [auth W]
PharosP01138
C [auth X],
D [auth Y]
PharosP04629