1XD6 | pdb_00001xd6

Crystal structures of novel monomeric monocot mannose-binding lectins from Gastrodia elata

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1xd6a_ All beta proteins beta-Prism II alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins Gastrodianin (antifungal protein) (Gastrodia elata ) [TaxId: 91201 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Familyalpha-D-mannose-specific plant lectins 8079824 4002774 SCOP2 (2022-06-29)
ASCOP2 Superfamilyalpha-D-mannose-specific plant lectins 8079825 3001730 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALdl_recept_be1xd6A1 A: alpha bundlesX: Cloacin translocation domainH: Cloacin translocation domainT: Cloacin translocation domainF: Ldl_recept_bECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.90.10.10 Mainly Beta Orthogonal Prism Agglutinin, subunit A Bulb-type lectin domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
gastrodianin-4- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001480Bulb-type lectin domainDomain
IPR036426Bulb-type lectin domain superfamilyHomologous Superfamily